Lytechinus variegatus (green sea urchin): 121416856
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Entry
121416856 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
lvg04137
Mitophagy - animal
lvg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121416856
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121416856
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121416856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121416856
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121416856
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121416856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf_C2H2_6
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
121416856
NCBI-ProteinID:
XP_041466307
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Position
6:complement(3560867..3585569)
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AA seq
281 aa
AA seq
DB search
MQKALRKLHSVASMSRPAANGKARSHTPTTNQDLASLFECPVCFDYVLPPILQCQSGHLV
CSNCRPKLNCCPTCRGPLGSIRNLAMEKVAQTVMFPCRYASSGCVATMSYNEKQDHEETC
EYRPYSCPCPGASCKWQGSLDQVMPHLTHAHKSITTLQGEDIVFLATDINLPGAVDWVMM
QSCFGHHFMLVLEKQEKYDGLQQFFAIVQLIGSRKQAENFAYRLELNGHRRRLSWEATPR
SIHEGVQAAIMNSDCLVFDSSIAQLFAENGNLGINVTISMC
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagccctgcgcaagctgcatagcgtggccagcatgagccgacctgcggccaat
ggaaaggctcgaagccacacccctacgaccaatcaggaccttgcaagcctgtttgaatgt
ccggtgtgcttcgactatgttctaccaccgatccttcagtgtcagagcggtcatctagtc
tgctctaattgccgacccaaactcaactgctgccccacgtgtaggggtccattagggagc
atcaggaatttagctatggagaaggtagcccagaccgtcatgttcccgtgccgctacgca
tcgtccggctgcgtggccaccatgtcctacaacgagaagcaggaccacgaagaaacgtgc
gagtatcgcccctactcctgtccttgcccgggggcctcctgcaagtggcaaggatcgctg
gaccaagtcatgccccacctgacgcatgcccacaagagtatcaccacgttgcaaggtgaa
gatattgtattcctagctaccgacatcaatcttcctggtgctgtggactgggtcatgatg
caaagctgcttcggccatcactttatgctcgtcctggagaagcaagagaagtacgatgga
ctccagcaattcttcgctatcgtccaactgattggatcaagaaaacaagccgaaaatttt
gcttatagattagaactgaacggccataggagacggctatcatgggaagccacaccccgc
tccatccacgaaggcgtccaagccgccatcatgaacagcgattgtctagtcttcgattct
agtatcgcgcaactcttcgcagaaaacggtaacctcggtatcaacgtcacgatatcgatg
tgctga
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