Lytechinus variegatus (green sea urchin): 121416892
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Entry
121416892 CDS
T11173
Name
(RefSeq) condensin-2 complex subunit D3-like
KO
K11491
condensin-2 complex subunit D3
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lvg03036
]
121416892
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
121416892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
PDS5
HEAT_2
CLASP_N
Cnd3
Cohesin_HEAT
Adaptin_N
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
121416892
NCBI-ProteinID:
XP_041466353
LinkDB
All DBs
Position
6:4838382..4891797
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AA seq
1689 aa
AA seq
DB search
MAKGPESNVAERFATLGIELLDEGWVNAVWESDFTENPELPEGVKGQWDNQREVLRSLKD
AIDCSTPWARVDFATLPQGFWNILCENGIVPRSLLAGLHHFMNRVDSLLSSAVEREIAIS
AAHLYILLLEIPGSGAYRVQQPMLFEEALDTFKLWPKTESNKRKRPESKGHRSSQPQGGK
KSRRITSSQTASQKAHDAGNDEEEDMEEDEEEVVSLTTQEVDRIHRAIYHAIREVVFLLR
NVPLKSSEEIIEHVMQRLAEVSRVPTEQGWDSHFGNKSSLEDVYSISHLAYLGLEALCTG
SHGDPSHMLRQVFKHLLPNILMLIGENQAVASTSIPKHIQQMKDHAEAFASHMYKDIGEK
SLPCLRVLMQHMCVKVPDKVEYRTRASHTIARILAGIPAETEASFVKWLFLYSKNAKISY
RVFALEVVGALLERPERQSAGEGNQEQFLSHRFLLDIMVSRCSDKAPTVRAKALSCLAQF
TALAGNQASNPLSDILAAPTAKTGATPVLVLEDAIKEAAAGSTKDNAPAGHAGTDAMDCG
STVNDGGSGEVAEESVKEKGPSEPKKGATPGNLMGGSPALLFGDDSAAGFVGSSGLLNCL
KERICDDKVGVRKAALQALENIFKLQCMAFDLQLLEILRERCRDTALSVRKQALDSLTSL
LKESPTDERVQRVWLQGVLPTVSDRESSASEKCLQLLQDLVLDGVCRKGVTETKKRLAWS
LLCQLMEPDLCDLRVYFQRVCRLWARQKLLTPSLVKGLAEHTQGDNTVAAWMFLSQVSHF
CPHLDKALVLSTWHDLTSDLTNSSVNSTAQGSTNSEILTSVLSVIGSLASHLVEDERKDL
VQGMVQRLVTQMDSPNLMGAMIETVYKLCCACVGENETANPLLDQSCDTILQACDSYLSQ
ILLTEDAPRPDDATEEKLIARIFLLGEIAQLCPYRMPRRVFTLVQSLLAGPGAAISEGTD
LPSSQGLTQFSQQPLSQFRTNGSPVSMAVRAHAFVTLGKLCLHHEGLAKQCIAALARELE
IAEDAAVRNNVALVMCDLCIRYPNLVDRYVPNLAACLKDKDKLVRKQTLTQLTQLVLEDY
VKWRGPLFFRFVSVIVDEVDTVRDFAEYCLVELLLKRHPGMLMQQFVESVFHFNNYRKHS
VFNQFTQSDRERELFSLQGSENSEKRMIIFKFMLKHMTDEHRFKLTAKLIQEVLGAFVDG
VLSLDNESSPILQDTLKILCCKEIKLTSLHSKQANPDDIVEEMQMAEAVMAQAKTKLISQ
VVKKNVIENIIPVIIALKHMLEEKHSPLLGDLMLYLKELMKEYRNEIKDILAADRQLASE
IEFDLRKFDEQQAEAAKQAVQEKDKANTPGKAGKETPTAEGMQKPATPGLTKTPQLLSPR
SVAGRSPRVTGQSPKTPTSKVAPTKERLLAAQAIVNSARRAFATARRANTPGNNTPSANA
SPRVQQGGTPPRPQAGGASDGTPPPPGPHARRASDGTPPQARPQPGLAKDGMMENEGGAS
TGIEERVRRVRVSEDTTPESSLRSPLRESCDQNTSKESEPDIQRAISTPDKTIANITFQA
PMDMSIIPLSSPIPTSLPIRVYSDQRPSSKGTKSWVPQLESHEEIQIKKENLVLMFSPEQ
PAPKPRLWNITSPQVDQKPSSRRPPAESQPTSSTSSDKAEAGGRRSRRRGPSENEPEPER
RRSGRMKAR
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggaccggaatctaacgttgctgaacgctttgcaactttgggtattgaactc
ttagatgaaggatgggtgaatgcagtatgggagagcgacttcacagaaaacccagagctt
ccagagggggtcaaaggtcaatgggacaaccaacgtgaagtcctaaggtcattgaaagat
gccatcgactgctccacaccgtgggccagggtggactttgccacactccctcaagggttt
tggaacatcctctgtgaaaatggaatagtacccaggtctctgctggctgggctgcaccat
ttcatgaatagggtggacagcctcctttcatcggcagtggaaagagagattgcaatatcg
gccgctcatctgtacatcctcctgcttgagataccaggaagcggagcttaccgtgtgcag
cagccgatgctcttcgaggaagctttggacaccttcaagctctggccgaagacggagagc
aacaagcggaagcgccccgagtccaaaggccatcgaagctcccagccacaggggggcaag
aagtcccgtcgcatcacctccagccagaccgcatcccagaaggcccacgatgccggcaac
gatgaggaggaggatatggaggaggatgaggaggaggtggtttccttgacgacgcaggaa
gtggatcgcatccaccgggctatctaccatgctatcagggaggttgttttcttgctgagg
aacgtgccattgaaaagttctgaagagatcatcgagcacgtcatgcaacgtctggccgag
gtcagtcgtgtccccacggagcagggctgggattcccactttggaaacaagagttctcta
gaggatgtatacagtatcagccatcttgcctaccttggtctagaagctctctgcacaggt
tctcatggggatccctctcacatgctacgacaggttttcaagcatctgcttccaaacatc
ttgatgttgatcggcgagaatcaagccgttgcctcgacatccataccaaaacacattcaa
caaatgaaagaccatgcagaggctttcgccagccatatgtataaggacataggggagaaa
tccttgccgtgcttgagggttctaatgcagcacatgtgtgtcaaggtgccggataaggtc
gagtatcggacgcgagcctcacataccatcgctcgcattctcgctggtattccggctgaa
acggaagccagcttcgtcaagtggctcttcctttactcgaaaaatgctaagatcagctat
cgtgtctttgctcttgaagtagttggtgcccttttagagaggccagagagacaatcagca
ggcgagggcaaccaggagcagtttttatctcatcgttttttgcttgacatcatggtatcc
cgctgctccgataaggcacctactgttcgagccaaggcgctgagctgtctagcccagttt
actgccctcgctggtaaccaagcgtccaaccctctgtcggatattctagctgcccctacg
gccaagaccggggctaccccggtgcttgttcttgaggatgcaatcaaggaagcagcagca
ggatcgaccaaggacaacgcacctgcagggcatgctgggactgacgcaatggattgtggg
tcgacggtgaacgacggggggtctggagaggtcgcggaagaatctgtgaaggaaaaaggt
ccctcagagcctaagaagggtgccacccctgggaacttaatgggaggatcccctgctctg
ttgtttggagatgatagtgcagcaggttttgttggtagcagtggactgttgaattgcttg
aaggagaggatctgtgatgataaagtcggagtacgcaaagcagctctacaggcacttgag
aacatcttcaagctccagtgcatggcctttgaccttcagctgttggagatcctcagggag
cgttgccgtgatactgccctctctgtccgtaagcaggcactagactcgctcaccagtctt
ctcaaagaaagcccgaccgacgaaagggtccaaagggtatggcttcaaggtgtcctgcca
acggtgtccgaccgagagtcgtcagcctcagagaaatgcctgcagctccttcaagatctc
gtccttgatggtgtatgcaggaagggtgtcaccgagaccaagaaacgactggcgtggagt
ctactgtgtcaactcatggaacctgacctgtgtgacctcagggtgtatttccagcgagta
tgtcgtctgtgggcgaggcagaagttactcaccccatcgctcgtcaaaggcttggcagaa
cacacgcaaggagataatactgttgctgcctggatgttcctgtcccaggtctctcacttc
tgccctcacctggacaaggccctggtcctctcgacctggcacgacctgacctctgacctc
acaaacagttcagtgaactctacagcacaggggtcaacgaactctgagatcttgaccagc
gtgctttccgtcatcgggagtctggcaagccaccttgtagaggatgagaggaaagatctt
gtgcaggggatggttcagaggcttgttacgcagatggactctccaaaccttatgggagct
atgatcgaaactgtgtataagctttgctgtgcctgtgtcggtgagaacgagaccgccaac
ccgctcctagaccaatcctgcgacacgatcctccaagcctgtgactcgtacctctcccaa
atccttctcaccgaagacgctccaagaccagacgatgccacggaggagaagctcatagcg
cggatcttcctgctgggcgagatagcccagctgtgtccctacaggatgcctcggagggtc
tttaccctggtccagtctctccttgcgggtccaggagctgctatctctgaaggaactgat
ctaccttcttctcagggtctcacccagttctcccagcagcccctctcccagttccgcacc
aacggttcccctgtatcaatggccgtccgggcccatgccttcgtaaccctaggcaagctg
tgcctccaccacgaaggcctcgcgaagcagtgcatcgctgccctcgcccgggagcttgag
attgcggaagacgcggctgtcaggaataacgtcgctttggtcatgtgtgatctgtgcatc
aggtaccctaatctcgttgatcgctacgtgcctaatctagcagcctgcctgaaagacaag
gataaactggtcaggaaacagacgctgactcagctcacccagctagttctggaggactat
gtgaagtggagaggaccccttttcttccgcttcgtttccgtcatcgtagacgaggtggac
actgtgagagactttgctgagtattgtttggtggagctcctattgaaacgtcatcccggg
atgctgatgcagcagtttgtcgagagtgttttccatttcaacaactatcgcaaacactct
gtcttcaatcaattcacacaatctgacagagagagggagctcttcagtttacaaggaagc
gagaactctgagaagagaatgatcatctttaagtttatgctcaagcacatgactgatgag
catcgcttcaaactaaccgctaaactcatacaagaggttcttggagcatttgttgatgga
gttctctctcttgacaacgagtctagccccatcctccaagatacgctgaagattctctgt
tgcaaggagatcaagctaacctccctccactccaagcaagcaaaccctgatgacattgtt
gaggagatgcagatggccgaagccgtcatggcccaagcgaagaccaaactcatctcccag
gtggtcaagaagaatgtcattgagaacatcatccctgtcatcatcgccctcaagcacatg
ctggaggagaagcattctccgttgctaggcgacttgatgctctacttgaaggaactgatg
aaggagtaccgcaatgaaatcaaagacattcttgcggccgatcgtcagctggcctcggag
atcgagtttgaccttcgcaagtttgatgaacagcaggcggaagccgccaagcaagccgtt
caggagaaagacaaggccaatacgccgggcaaggcaggaaaggagacgcccacggcagaa
gggatgcagaaaccagctactccaggacttaccaagacaccacagcttctttcaccaagg
tccgtggcgggtcgttcgccgagggttactggacagagccccaagacgccgacaagcaag
gttgccccaaccaaagagagacttcttgctgcccaggccatagtgaactccgcccggcga
gcctttgcgaccgccaggcgtgccaacacccccggaaacaacacgcctagtgccaacgcc
agccctagggtgcagcagggtggcacccctccacgtccccaagctggaggggcgagtgat
ggtacccctccaccgcctgggccccatgctagaagggcaagtgatggtacccctccacag
gctcggccccaacctggattggcgaaagatggaatgatggagaatgagggcggggccagt
acggggatcgaggagagggtacggcgggtacgcgtcagcgaggacaccactccggagtcc
agtctgcgatcgccgctcagggagtcgtgtgatcagaatacatcaaaggagagtgagcca
gacatccaacgagctatcagcacaccagataagacgattgcaaacatcaccttccaagct
ccgatggatatgagcatcattccgctctcgtcccccatcccgacatcactaccgatcagg
gtctacagtgaccaacgcccttcatcgaaaggtactaagagttgggtaccccagctggaa
tctcatgaggaaattcagatcaagaaagaaaacctggttctcatgttctcaccagaacaa
ccagctccaaaacctaggttgtggaatatcacctcaccccaggttgaccagaaaccaagt
agtcgtcgaccaccagcagaatcccagccgacatcatcgacctcctctgacaaggccgaa
gcaggaggacgacgaagtaggcgaagaggtccttctgaaaatgaacccgaaccggagaga
cgacgaagcggccggatgaaagctcgctaa
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integrated database retrieval system
