Lytechinus variegatus (green sea urchin): 121417188
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Entry
121417188 CDS
T11173
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121417188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121417188
Spliceosome [BR:
lvg03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121417188
Complex B
121417188
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_PARP14_3
xRRM
Motif
Other DBs
NCBI-GeneID:
121417188
NCBI-ProteinID:
XP_041466724
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All DBs
Position
6:21326624..21343981
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AA seq
250 aa
AA seq
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MAAPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKDIMS
ATSALRSMQGFPFYDKPMRIQYSKTKSDAIAKMQGTYVPREKRIEKKKAEEPVKGRKNRQ
NRHADVIIPPPSQIPMPGAPPVNQPPPLLGDMSMLGQPPIQAPPAPAPVVPDEPNNILFL
TNLPEETNELMLEVLFKQFNGYKEVRLVPGRHDIAFVEFANDQQSGKAKDSLQGFKITPT
NTLKIAFAKK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccaaatcacacaatttacatcaacaaccttaatgaaaagataaagaaagat
gaactcaagaagtcgctgtatgccatattctcccagtttggtcagatcttggacatcgta
gcgctgaagaccctcaagatgcgaggtcaagcctttgtaatcttcaaagacatcatgtcg
gctaccagcgcactgcggtccatgcagggcttccctttctatgataaacccatgaggata
cagtactcaaagacgaagtcggatgcaatcgccaagatgcagggaacttatgtcccaaga
gaaaagaggatagaaaagaagaaggctgaggagccggtgaagggcaggaagaacaggcag
aatagacacgcagacgtcatcatcccccctccctcacagatccccatgccaggagctccc
ccagtcaaccagcccccacccctgctgggtgacatgtccatgctgggtcaaccgccgata
caagccccacctgcaccggcaccagttgttcctgatgagcctaataacatccttttcctt
acgaatttaccggaagaaaccaatgagctcatgttggaggttttattcaagcaatttaat
ggatacaaggaagtccgtctcgtcccagggagacacgacatcgccttcgtggaattcgct
aacgatcaacaatcgggaaaagcaaaggattctctccaaggatttaaaatcaccccaaca
aacactcttaaaattgcattcgccaaaaaatag
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