Lytechinus variegatus (green sea urchin): 121417314
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Entry
121417314 CDS
T11173
Name
(RefSeq) deubiquitinating protein VCPIP1-like isoform X1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvg01002
]
121417314
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121417314
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121417314
Peptidases and inhibitors [BR:
lvg01002
]
Cysteine peptidases
Family C64
121417314
Ubiquitin system [BR:
lvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
121417314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121417314
NCBI-ProteinID:
XP_041466903
LinkDB
All DBs
Position
6:complement(27998132..28021412)
Genome browser
AA seq
1279 aa
AA seq
DB search
MKKHERHCFLSGVCPDEHCQTKLYFPSYDRTVECTSCGQVHECRSLRSVAEVTDPDVVIH
NMVRNLLMGNLAPKKTTDSIKVLGLSNYHCKLLSPLLTNFGMDKDGNAQPLECLTKDKSK
IFNCANLGGRAFLIQPEHIDIMGYGRDQTGSAHYLCNTLEQIKQVNRDEEVLIPIHADGD
GHCLVHGISRALVGRELFWHALRTNLKNHFEENLDRYKNMFRDFVDNSEWPQIIAESDPD
YLPGPNEAMGLQNIHIFGLANILRRPIVLLDSLSGLESFGDYSGVFLPVLSTPAECSGKD
GKLNKPLCVAWSSSGRNHFIALVGVKGRPLPRLPRWMLSKAWGTSQEEVNRYIEFDGDNM
CTVGGDRALTENYVQRLVTAMEDEFKKKHGVHPSLVSDVYNFISKRTGIGGIHQNVIIEH
TRASVQDHQLYRCLICSAVSQVPYPQGYNGSPSGLKEGGELYVLAKQTHGTLQEGRVYDF
PTQDIQCTYDASSDELIPDHTFNQDATCPWCKGKQLRRVKTDGSIVYMNGDRTSAASSST
TCTCGHKHFWDGVEYDNPPKIFKVPLVWKGKTIEEEVVWFQNEPDPSLNSNAFKLAESLV
NKHYPGEFGNEQLVQKVVESILHNTASREAAYQPPSLSDMPGPSTSSTAKPEEASRSSGE
KSEGVESLPNEGRDSPRKQLGMKKKEGSAASSSSMNSPSKIILSGGSKSLHKEELTMSET
EKALRKKIAKNAPQNQQQKSLQQTADRSNQSSSSSGVGEMKFVAMETVSSRTIEPPSDIR
IKLSSSEGKHTTLVLAGSTTYSQLQTLIESKFHIAPAKQRIKYGFPPKELRAPPSGEEGS
SLPLRNGDKVTVEVIQDITRADPHYMASGIAATKQKRFSEQGLNQGALLKEFQKDINKMR
DSDESNLEVQLTSHTLMAALNGLDLWNYSKRKPELFSRGGLFYNIVERDLGLEDGKHCML
PSIPKKRFRFSQPNDRLELCLEPLGHFPVSSEVDDLEKFKDVALGQRSLEMSESEVELEA
SSSGYVAFAGRGHSLSVDGGATAADGATASKKYPKFGGDCGGDGKQGLEVAMDQVQYEES
HIPSQSGHPYGGMDESVLKQEQCVEMEHSKDGAGIQRGEGEGMTEGGKGEREIPMDVEDE
AVETSKPTPMEVDSSNQSMPEPFNQSQTASMVAELRRSTTEPVIGAISQEAAINRTASEP
SSQLPLNSPNITAELPASSSSQGAANTKPSQGDINPSDSVIGSEGKDNRETANEDCSYVS
RRLGPGYTVLVKREDEDKS
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacacgagcgtcactgctttctttctggtgtctgcccagatgaacactgccaa
accaaactgtacttcccgtcctatgatcgcactgtagagtgtaccagctgcggacaagta
catgaatgccgttccctacgatctgtagcggaagtcactgacccagacgtcgttatccac
aacatggtgcggaaccttctgatgggcaacttagccccgaagaagacgactgattccatc
aaggtcctgggtctgtccaactaccactgcaagcttctgagcccgctgctgacgaacttt
ggcatggacaaagatggcaacgcccagccgttggagtgcttgacgaaggacaagagcaag
atcttcaactgcgccaacctgggcggccgtgcctttctgatccaaccggagcacattgac
atcatggggtacgggagggaccagaccggaagcgctcactacctctgcaacactttagaa
cagatcaaacaggtcaacagagacgaggaagtcctgataccaatacacgccgatggggat
ggacattgtcttgtccatggtatctccagggctcttgtcggtcgggaactcttctggcat
gccttgagaacgaacctcaagaatcactttgaagagaacttggaccgttacaagaacatg
ttcagggattttgtggacaatagtgaatggccccagattatagctgagagcgacccggac
tatctaccgggacccaatgaggccatggggctccagaatattcatatctttggtcttgct
aatatcctcagaagacctattgtccttcttgactcgctcagtggactagaaagctttggt
gattattcaggtgtgtttctccctgtgttaagtacacccgctgaatgcagtggaaaggac
ggtaaactcaacaaacctctttgtgtcgcttggagcagctctggaagaaaccacttcatt
gcccttgtaggggtcaaaggtcgtccgttgccacggttaccaaggtggatgctctcaaaa
gcctgggggacgtcgcaagaagaggtcaacagatacattgagtttgatggcgacaacatg
tgcaccgtagggggagacagggcactaactgagaattatgtacagcgtctagttaccgca
atggaagatgagttcaaaaagaaacatggtgttcatccatcattagtgtctgatgtctac
aactttatctccaagagaacaggtattggtggtattcaccagaatgtgatcatagaacat
accagagcttcggtacaggatcatcagttgtacagatgcctcatctgttctgcagtgtcc
caggtaccctatcctcaaggctacaatggctcaccttctggtctcaaggaaggtggagaa
ctctacgtattggctaaacaaacccatggcactctacaagaaggacgggtctatgacttc
ccaacacaagacatccagtgtacctatgatgcatcctcagatgaactcattccggaccat
accttcaatcaggatgccacgtgcccatggtgtaaaggtaagcagcttcgccgggtgaaa
accgatggcagtattgtctacatgaacggtgataggaccagtgctgcgtcgagttctacg
acttgtacctgcggccataaacatttctgggatggtgtggagtatgataaccctcctaaa
atattcaaagttcctcttgtttggaagggaaagacgatcgaagaggaggtcgtttggttc
cagaacgagcccgatccgtcattgaacagcaatgcgttcaaacttgcagagtctctggtc
aacaaacattatccgggagaatttggtaatgaacaactcgtccagaaggtggttgaatcc
atactacacaatactgcaagcagggaggcagcctaccaaccaccctccctgtcagacatg
cctggcccgagtacatcatcaacggcaaaaccagaggaagcttcaaggagctctggtgaa
aagtcagaaggtgtggagagtttaccaaacgaagggagagactcgccaaggaagcaattg
ggaatgaaaaagaaggaaggatctgctgcaagctcttcatccatgaattcaccgtctaag
attatcctctccggtgggtccaaatccctacataaggaggaactgacgatgagtgaaacg
gagaaagcactcagaaagaagatagcaaagaacgctccccaaaatcaacaacagaaatcc
ttacaacagacagcggatcgatccaaccagtcgtcatcctcatcaggagtcggggagatg
aagtttgttgccatggagaccgtgtcatcaaggacaatagaacctccgagtgatatacgg
atcaagcttagttcctctgaagggaagcatactacactagtcttggctggatcaactact
tattctcagctccagactctcatagaatccaagtttcacattgctccagccaagcagagg
atcaaatatggctttcccccgaaagagcttagggcgccccctagtggtgaggaaggtagt
tcgctgccattgaggaatggggataaagtaaccgttgaagtcatacaggatattacgaga
gctgatccccattacatggcatctggaatagcagctaccaagcagaagaggttcagtgaa
caaggattaaatcaaggtgctcttctgaaggaatttcagaaagacatcaacaagatgaga
gatagtgatgaaagcaatctagaggtccaactgacttcccatactctgatggctgcactg
aatggattggacctgtggaactattcaaagaggaagcctgaactattctcgagagggggg
ttattttacaacattgttgagagggaccttggtcttgaagatggcaaacactgcatgctt
ccctctatacccaagaagagattccgtttctcccagcccaacgatcgtctcgagctctgt
cttgaacccctgggtcacttcccagtttcatccgaggtggacgaccttgagaagttcaag
gacgtggccttgggtcagaggtcgttggagatgagcgagagcgaggtcgaacttgaggct
tcctctagtgggtacgtcgcatttgctgggaggggtcactcgttgagcgttgatggaggg
gctacagccgctgatggagctacagcatcaaagaaatatcccaagtttgggggggactgt
ggaggcgatggaaaacagggtttagaagtggccatggaccaagtgcaatatgaggagagt
cacattccaagtcaatcgggacacccctatggtggaatggatgagtccgtcctgaagcag
gagcagtgtgttgaaatggagcattccaaagacggtgcaggcattcagaggggagaaggt
gaggggatgacggaaggagggaaaggagaaagggaaatccctatggatgttgaggatgag
gcggttgaaacgagtaagcctacaccaatggaggtggactcttctaatcaatccatgcca
gaacctttcaaccaatcacagacagcttctatggtggcggagctgcgcaggtctacgacg
gaacctgtgattggtgcaatatcgcaagaggcggcaataaacaggacagcctctgaaccc
agttcgcagctccctctcaacagtcccaatatcaccgctgagctacctgccagtagctcc
tctcagggagcagcaaatacaaagccatctcaaggagacatcaatccatcggactctgtg
attggctctgaggggaaagacaatagagagacagccaatgaggattgttcttatgtttcc
aggagactaggtcctggctacacagtgcttgtaaagagagaagatgaagacaaatcataa
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