Lytechinus variegatus (green sea urchin): 121417380
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Entry
121417380 CDS
T11173
Name
(RefSeq) plastin-3-like
KO
K17336
plastin-3
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121417380
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121417380
04147 Exosome [BR:
lvg04147
]
121417380
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
Check point factors
Other check point factors
121417380
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121417380
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121417380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
SAPC2_N
CH_2
SPARC_Ca_bdg
EF-hand_FSTL1
Motif
Other DBs
NCBI-GeneID:
121417380
NCBI-ProteinID:
XP_041466998
LinkDB
All DBs
Position
6:32060443..32127223
Genome browser
AA seq
618 aa
AA seq
DB search
MDDIEEIREIFNQMDLNRDGFLTDKEIQEILQAKGESFPAYKCRDFIREYDTDKNGSLTF
DEFMKLYDDIKKNKVSSGFLTQVKARVGIQAEKGTSEVSAAGTTHSFSKEETAAFTRYIN
DGLNLTNDPALASKLPISVESGLFEAVVDGILLCKMINSSVPNTIDERVITTTKLNKFTQ
LENLTLALNSAKAIGCSVINIDPMDIQNKTKHLVLGLVWQIIRIGLFANIDLQFRPELIL
LLNEGETLDDLKKLSPEELLIRWVNYHLEQDGSTRRIKNFSEDIKDSEVYYCLMRQIAPK
DIELSYTHMNRPSMDSRAEEVLNNAELLDCRAFVTPKDIVSGNSKLNMAFVANLFNHHHG
LVPSEEMEYENVEETREEKTYRNWMNSLNVKPYVNHLYSDLSNGLVLLELFDIVNPGIVN
WEKVNRPPYKMAAKMKKIENCNYCVELGRKMNFSLVGIGGQDICDGTVTLTLAVVWQLLR
AYTLRMLQEINQSDKPLSDQEIVSWANTKLEEAGKSSKINSFKDPRIADSLPILDLVDAI
KPSSVRYDLYIDPRTGENGEERDSIRMKNAQYTISIARKHGAMVYALPDDIVEVNPKMVM
TIFACLMALDRAITNRSS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatgatattgaggaaatcagggagatttttaatcagatggacttgaaccgtgatggc
tttctgacggacaaagaaattcaggagatcctccaggccaagggcgagagctttcctgcc
tacaaatgcagggacttcatcagagagtacgataccgacaaaaacggttccctcactttt
gatgagtttatgaagctgtatgacgacatcaagaagaataaggtttcatcagggtttctc
actcaagtaaaagccagggtaggcatccaggcagagaaaggaacatcagaagtaagcgct
gcaggaacaactcattccttctcaaaggaggagactgcagctttcacaagatacatcaat
gatggtctgaacttaacaaatgatcccgcccttgcttccaaattgccgataagtgtggag
agcgggctctttgaagctgtggtggacggcatattgctatgcaaaatgatcaacagttcg
gttccaaacaccatcgacgaaagggtcatcaccacgaccaagctgaacaagttcacccag
cttgagaacctgaccctggctcttaattcggccaaggccatcggctgcagcgtcatcaac
atcgaccccatggacatacagaacaagacgaagcatctggtcctgggtctcgtctggcag
atcatccggattggactgtttgcgaatattgatctgcaattccggcctgagctgatcctt
ctcctgaacgagggtgaaacacttgacgatctcaagaaactgtcccccgaggagctcctt
atcagatgggtcaactaccatcttgagcaagacggatctactcgccgcatcaaaaacttt
tccgaggacatcaaggattcggaggtgtattactgcctaatgagacagatagctcccaaa
gacattgaactaagctacactcatatgaacagaccgagtatggattctcgtgccgaagag
gtccttaacaatgctgaacttcttgattgcagagcatttgtcacaccgaaggatattgtt
tctgggaactccaagctgaatatggctttcgtggctaacctcttcaaccaccaccacggc
ctggtcccctcagaggaaatggagtatgaaaacgttgaagaaacgcgggaggagaaaaca
taccgtaactggatgaacagtctgaacgtgaaaccatatgtgaatcacctttacagcgat
ctgtccaacggtcttgtccttttagagctgtttgacattgtcaaccctggtatcgtcaac
tgggaaaaggtcaacagacctccgtacaagatggccgctaagatgaagaagatcgagaac
tgtaactactgtgtcgagcttggacgcaaaatgaatttctctcttgttggaatcggaggg
caggacatctgtgatggaactgtcaccctcactctcgctgttgtatggcagctgttgaga
gcctatacactgcgtatgctacaggagatcaaccagagtgacaagccccttagtgatcaa
gagatcgtcagctgggcaaatacaaagctcgaagaagcagggaaatcctccaagatcaat
agcttcaaagatccacgaatcgccgattccctgcctatactggaccttgtagatgccatt
aagccgagcagcgtccgatatgatctctacatcgatccacggacaggagaaaatggcgag
gaaagggatagcataagaatgaagaatgcacagtacaccatcagcattgctcgcaaacac
ggcgccatggtctacgcgctcccagacgacatcgtcgaggtcaacccgaagatggtcatg
acgatcttcgcttgcttgatggcgctcgaccgagctataaccaacagatcttcttaa
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