Lytechinus variegatus (green sea urchin): 121417505
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Entry
121417505 CDS
T11173
Name
(RefSeq) nucleoporin NUP35-like
KO
K14313
nuclear pore complex protein Nup53
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121417505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121417505
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121417505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121417505
NCBI-ProteinID:
XP_041467160
LinkDB
All DBs
Position
6:complement(42287515..42298550)
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AA seq
349 aa
AA seq
DB search
MEGPQGTESMILGSPQSSSTSLPSSLSSQFLPAYLIGEQSPAVSPASGRQRTLLRSPSRT
MSPSTLGPRDSSLLRIDSTENRVGQTPRTTSHTPKDKGNAPPVAGLYDPIEASRGSPAVF
DTPERRQLDFTQAPSRASRTLDSPAASRLFSPSQQSMVQSSQWSMQAPPSPPQVDPFYTQ
GESILPEDELDDTWITIFGFQSAATSYILQQFSQYGNIVSHVVASSGNWMHVQYSSRIQA
RKALSKNGKVFGGNIMVGVTPCIDKGVMSGGTSDSYGVNTTGIGDAPITPAKRLASQSEE
QETTRRTPIRPLTAAYKAASNPHEVIQESRTPQKSSNVVSKTLEYMFGW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcctcaaggcacagaatcaatgattcttggctctccacaatcctcttcaact
agtcttccatcaagtctgtcaagtcaatttcttcctgcctatcttattggagagcagagc
cccgcagtttcgcctgccagtggacgtcagagaacgctattgagaagtccatcaaggaca
atgtccccatcaactcttggaccaagggatagtagtttactcagaatagactccactgag
aatcgtgttggacagacgccaaggactacttcacacacacccaaagataaaggcaatgcc
ccacctgtagcgggtctatatgatcctattgaagccagtagagggagtcctgctgttttt
gatacaccagaaaggagacagttggattttactcaggccccttcaagagcatcaagaaca
ttagattcccctgcggctagtcgtctgttctccccctctcaacagtcaatggtacagtcc
agccaatggtccatgcaggcaccgccatcaccaccacaggttgatccattctacacacag
ggagagtctatcttaccggaggatgaattggatgatacttggatcacaatatttggtttt
cagtcagctgcgacatcctacatccttcaacagttttcacagtatggcaatatagtctca
catgtggtggctagttctggtaattggatgcatgttcagtacagctctcgtattcaagca
aggaaagcgttgagtaaaaacggcaaggtattcggtggtaatatcatggtaggagtgacg
ccctgtatagacaagggggtaatgagtgggggtacatcagactcttatggggtgaatact
accggtataggggatgcacctattacccctgctaagagattagcttcacagagtgaggaa
caagagactacgagaagaacacctataagaccactgaccgctgcatacaaggcagctagt
aaccctcatgaggttattcaagagagtagaactccacagaagtccagcaatgttgtcagt
aagacattggaatacatgtttggatggtga
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