Lytechinus variegatus (green sea urchin): 121417555
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Entry
121417555 CDS
T11173
Name
(RefSeq) ATP-dependent RNA helicase DDX51-like
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121417555
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121417555
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
121417555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
121417555
NCBI-ProteinID:
XP_041467227
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All DBs
Position
6:complement(46754064..46777047)
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AA seq
783 aa
AA seq
DB search
MALFTVNRYLGESPLELGQSSKSSILDKINAKAKEREEQRKQTPCKETPPSKRSKVKGQT
QRRTEKDELTPSTDSGLQRKKKRRSFIEKDCGRNGQGEVSTGDVGQESEKNDGKDDDVIS
MEITNNAMVISKETFLHDGKASEKTKKKKGKRKHDTENKKEEEEDMNARLTDEGKEKDGE
LQAFSPSHIERKKETLKSLKKKKRLKEIKKKDENQTSDEDEENKQMEVVTKDDEEVDDGS
MIEGAIEAIEEHHDFVVLGDFERKHKKKVYEALPDWLARPSVIKQSLTNDLQSVTSVKGL
DERLVTALAEMGVDKLFPVQQHVIPILLKSLQYGIHTGHAGYRPSDLCISAPTGSGKTLA
YAIPIIQALIDRVVCQVRALIVLPTRDLATQVYKIVSSLCKATPLRPVLIGGIKKFSQEQ
SGLVKEIDGEFHSLADIVIATPGRLVDNLCKTVGFNLHHLRFLVIDEADRLMEHISQDWI
AQVEKSAYTPQSDNGIAPPSFTSIRQRPGPLTVRRSSAYQLPLQKLLFSATLSQNPEKLT
QLRLFQPHLITTATSSKATPTSGLNLDREKDRLDEEGEDIDEGRSDFVGKYTTPVGLSEY
YVQCTAGEKPLVLKHFLINLYFKQVLCFTNSVQTTHRLYLLLKLMGGIDVAEFSSNLSQA
QRQNILKQFKAGKIQILICSDAMARGMDIENVRCVISYDLPPHLKTYIHRVGRTARAGRG
GTAFSFVRKKEVNEFKHMLRNAGKDGIQRHTVSSNHLEALTPSYSEALSKLSTLLREEKA
HTL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcgttatttacagtgaatagatatttaggggaatcgccattggagttgggtcaaagt
tcgaagtcaagtattcttgataagattaatgccaaggctaaggaaagagaggaacaaaga
aaacagacgccttgtaaggaaactcctccttctaagaggtcaaaagtcaaaggtcaaaca
caaaggagaacagagaaagatgaactaaccccgagcacagattctggtttacaaaggaag
aagaagaggagatcttttatagaaaaggactgtgggaggaatggacaaggtgaggtatca
acaggggatgtgggacaggaaagtgaaaagaatgatgggaaggatgatgatgttatttcc
atggagattacaaacaatgcaatggttatctcaaaggagacattcctccatgatggaaag
gcttcagagaaaacaaaaaagaagaaagggaaaaggaaacatgatactgagaacaaaaaa
gaggaggaggaggacatgaatgcaagacttacagatgaaggaaaagaaaaagatggagaa
ttacaagctttttctccatcacatattgagagaaagaaagaaactttgaaatccttgaaa
aagaaaaagaggttaaaggaaatcaaaaagaaagatgaaaatcaaacttctgatgaagat
gaagagaacaaacaaatggaagttgttacaaaggatgatgaagaagtagatgatggaagt
atgatcgaaggagcgatagaggcaatagaggaacatcatgattttgtagtactaggagac
tttgaaaggaaacacaagaaaaaggtttatgaggctctacctgattggttggctagacct
tctgttatcaaacaaagtctgacaaatgatttacaatcagtcacttcagtcaaaggtctg
gatgagagactagtcacagctttggcagagatgggagtggataagctctttccagttcag
cagcatgtaattcctattctactaaagtctcttcagtatggtatacataccggtcatgct
ggttatagacctagtgatctctgtatatcagctcctactggtagcggtaagacgcttgca
tatgctattcctataatacaggctctgattgatagagtagtttgtcaagtgcgagctctc
atcgttctcccaacacgtgaccttgccacccaggtttataagattgtcagctcgctctgc
aaggccacgcccctcagacctgttctaattggaggaatcaagaaattctctcaagaacag
agtggacttgtaaaagagattgatggagaatttcattcccttgctgatatcgtcatagca
acacctggaagacttgttgataatctctgtaagactgttggattcaatcttcatcatctt
cgctttctggtgattgatgaagcagatcggttgatggaacatatctcacaagattggatt
gctcaagttgaaaaatcagcttacacccctcagtctgataatggaatagccccaccatca
ttcacttcaattagacaacggcctggtccattgacagtcaggaggtcatcagcatatcaa
ctaccgcttcaaaagctgcttttctcagctactctctctcagaaccctgagaaattaaca
cagctaagattattccaacctcatcttatcaccacggcaaccagtagtaaggccacaccc
acatcaggattgaatctggatagagagaaggatagattagatgaggaaggagaggatata
gatgaaggaagaagtgactttgttggaaagtatacaactcctgttggtttatcggaatac
tatgtccagtgtacagcgggtgagaagccattggttctgaagcatttcctcatcaatctt
tacttcaagcaagtactctgtttcacaaatagtgttcagacaactcataggttatatctt
ctcttgaagttgatgggtggtattgatgtagcagaattctcatctaatctcagtcaagct
caaagacaaaacatcctcaaacaattcaaagctggtaaaatacagatcctgatctgttct
gatgcaatggctcgaggaatggacattgagaatgttcgttgtgtaatctcatatgatcta
ccacctcaccttaagacatatatacacagggttggacgaacagctagggctggaagaggg
ggcactgccttctcatttgtcaggaaaaaggaagtcaatgaatttaagcatatgctgagg
aatgctgggaaggatggcatccaacgacacacagtatcatccaatcatcttgaagctctc
acaccatcttacagtgaagcactttccaagctatccaccctactcagagaagaaaaggca
catacactttga
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