Lytechinus variegatus (green sea urchin): 121418200
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Entry
121418200 CDS
T11173
Name
(RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like
KO
K14589
cap1 methyltransferase [EC:
2.1.1.57
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121418200
Enzymes [BR:
lvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.57 methyltransferase cap1
121418200
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
121418200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
G-patch
WW_TCERG1
G-patch_2
WW
Motif
Other DBs
NCBI-GeneID:
121418200
NCBI-ProteinID:
XP_041467862
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All DBs
Position
7:2155886..2180304
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AA seq
860 aa
AA seq
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MDRKRKQQWESEDPPRSKKSHISDAGGDGGDVSYAPQQMFKSLSDASTDSDSSSSMGSPP
PVLYTPVGASMGASMVAPGGATVVSTKPAPGSSSSGYSSIAQNMMAKMGYKKGTGLGKLG
KGRVEIVEASKQRGRRGLGLKTKGFEPSSEVVWTGDEKISSQETVEWMEPSQGILSSAEI
EEWKVLWDAQKQKLTIDDETEFCDETLLKTLLDQKTTFDLLDGEEMRQARTRSNPHETIR
GGIFLNRAAMKMANMDFVCDYMFTSPKHPDGTPIVKDNELLYFADVCAGPGGFSEYVVWR
RTQSRQKKDFKVKGFGFTLKGNNDFKLEDFYSAPPEFFEPHYGVNGSEGDGDATNSDNQR
EFRRFVMEHTGGKGVHFVMADGGFSVAGQENIQEILTKQLLLCQFLVAMSIVREGGHFVC
KTFDLFTPFSVGLIYVLYRSFEQVSIFKPVTSRPANSERYVICKGRRSGTDPTHDFLFDL
NVTLNMLKSSKQDVLESVPLDVLRADNAFMDYIIEQNERQAETQTQALAKIQAYVQNSDL
IEMEQKRMRDECLALWGIPGRSRAAPKVPDAATKFDDLCQEDQGDYGYFCRRAMPLDKEN
FAQKVKSVYDYRCTVAAGERYFVLGIGRSYVYFWDGKNQPPRWRKLDRCKLQLPGGTLFE
AELIEELKGEGPGQRRMLTAHIIDAMWLAGQDIHSLPYSERLQRISLFVKAVDRPTRSDL
TPLRVKEVFRCQDVTEIMERLVMLVVKGGGRQRRLCYRTDNGRHYMPQGIFFIKTCNDPW
TVQWSRSQRRLYFFNMSNRNSVFEYPPESIASFKACRIHRLLWAWEEGIRLHDLQEMRED
PNKLSKDMVLDHIKKQRVVL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggataggaaaaggaagcagcaatgggagtctgaggatccccctcggtccaaaaaatca
catattagcgatgcgggcggtgatggaggggatgtgtcctatgccccccagcagatgttc
aaatccttgagtgatgcatccaccgactctgattcttcatcttcaatgggatcccctcct
ccggttctttatacccccgtgggtgcatcaatgggtgcatccatggttgcaccagggggt
gcaacagtggtctcaaccaagccagcaccgggatcatcctcttcgggatacagctccatt
gcacagaatatgatggctaaaatgggctacaaaaaaggcactggacttggcaaacttggc
aaaggacgtgtggagatcgtggaggcatccaaacaaagagggcgccgtggtcttggtctc
aagaccaagggctttgaacccagctctgaagtggtctggactggagatgaaaagatatct
tcccaagagactgtagaatggatggagccgtcgcaaggcatcctatctagcgctgagata
gaggaatggaaagttctatgggatgctcaaaagcaaaagctgacaattgatgatgagaca
gagttctgtgatgaaacattgctcaagacacttcttgatcaaaagacgacctttgacctt
cttgatggggaggagatgaggcaagcgagaacacgctccaatccccatgagaccatccga
gggggtatcttcttgaatagagcagctatgaagatggccaatatggactttgtctgtgat
tacatgttcacatcaccaaaacacccagatgggacacctattgtgaaagacaatgagctg
ttgtactttgccgacgtgtgtgccggccctggagggttctcagagtatgtggtatggaga
agaacacagtctcgccaaaagaaggacttcaaggtcaaaggttttgggttcaccttgaaa
gggaacaatgatttcaagttagaggacttctattccgcacctccagaattctttgaacct
cattatggtgtgaacggaagtgaaggtgatggagatgctacaaatagtgataaccaacgt
gagttcagaagatttgtaatggagcacaccggcggcaaaggcgtccattttgtcatggct
gatgggggattctctgtggcaggacaagagaacatccaagagattcttactaaacaactg
ttgctatgccaatttctggttgctatgtcaattgtgagagaaggtggtcactttgtttgt
aaaacctttgacctcttcacaccattcagtgttggtttgatctatgtcctgtatcggtca
tttgaacaggtctctatcttcaaaccggttaccagtcgaccagcaaattcagagagatac
gtcatctgcaagggtcgaaggtcaggcacagatcccacccatgatttcctctttgacctg
aacgtgaccttgaacatgctgaaatcaagcaaacaggacgtccttgagagtgtgccactg
gatgtactacgagcagacaatgctttcatggactacatcattgaacagaatgaaaggcaa
gctgagactcagacccaggctcttgccaagatccaggcttacgttcagaactcagatctg
attgagatggaacaaaagaggatgagagatgaatgtctagctctctgggggattccaggg
agatcaagagccgctcctaaagtcccagatgctgctacaaaatttgatgacctatgtcag
gaagatcaaggggactatggttacttctgcaggcgagccatgccattggacaaggagaat
tttgctcagaaggtcaagagtgtgtatgactatcgatgtacagtggctgcaggggaaaga
tactttgttcttggcattgggagatcatatgtgtacttctgggatgggaagaaccaaccg
ccaagatggaggaagctagatcgatgtaagctacagctaccaggaggcacgttatttgaa
gcagaactcattgaagaactcaaaggagagggtccagggcagagaagaatgttgacagct
catatcatagatgctatgtggttagcgggtcaggatattcattctttaccatactcagaa
aggcttcaaaggataagtttatttgtcaaagcagtagaccgacctacgagatctgacctt
acacctctgagggtcaaagaggttttcagatgtcaagatgtcactgagatcatggaaaga
ctagtgatgcttgtggtgaagggtggaggaaggcagagaagactgtgttacaggacagat
aatggtaggcattacatgccacaaggaatcttctttatcaagacatgcaatgatccgtgg
acagtgcaatggagtagatctcagaggagattgtatttcttcaacatgagcaatcgtaac
tctgtcttcgagtaccctccagagagcattgcctcattcaaagcttgtagaatccatcga
ttgctgtgggcctgggaggaagggatcagactccatgatctgcaagagatgagggaggat
ccaaacaaactctccaaggacatggtgctggatcatatcaagaaacaaagagtcgtgtta
tag
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