Lytechinus variegatus (green sea urchin): 121418241
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Entry
121418241 CDS
T11173
Name
(RefSeq) transforming growth factor beta-2 proprotein-like
KO
K13376
transforming growth factor beta-2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04068
FoxO signaling pathway
lvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121418241
04068 FoxO signaling pathway
121418241
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lvg04052
]
121418241
00536 Glycosaminoglycan binding proteins [BR:
lvg00536
]
121418241
Cytokines and neuropeptides [BR:
lvg04052
]
Cytokines
Transforming growth factors (RSTK binding)
121418241
Glycosaminoglycan binding proteins [BR:
lvg00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121418241
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
DAN
Motif
Other DBs
NCBI-GeneID:
121418241
NCBI-ProteinID:
XP_041467929
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Position
7:complement(3966133..4004706)
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AA seq
430 aa
AA seq
DB search
MFSAISTPCTRCLLASWLGLAVLSLTFDGLGAGGQCKFDLQEYQERRIAAIKGQILSKLG
LTALPTDDGPEEVDKRTMDLYNLTVSLLEEKYQNEKQQCQGLAGSSDDYFAQLPILYGIV
ETDIEKDIGNYATVKKLSKFFRFDLTSFEDDSQGDEVSEAEFRLYQVPNEMKDTEQQIDL
FQLIPSYNSTEEPTRRFLTSWTVSTTREGWLAHDVTDVVREWVADPESNLGFEVNLNCGD
YLQGPTTTTPAAITKDQHKLHVLFADPRGTFPSMDNGRGDGNPRGEGFPSINHPRLVVMA
PANHSKGGESNSVRRRRSASYSGSQCDQNSPNCCLRPLSINFRRDLKWNWIRQPRVYSPN
FCAGSCPYILSADTSHASVLSLYKHLNPDASPSPCCSPHSFRPLTILFYNRGRPEIRQLN
NMIIESCRCS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcaatcagtacgccatgcacacgatgcctgttggcgtcatggcttggctta
gcagttctttccctgactttcgacggtctcggtgccggtggacaatgtaagtttgatctc
caggagtatcaggaaaggcggatcgctgccatcaaggggcaaatactcagcaaacttggt
cttactgccctaccaacagatgacggcccagaggaggttgataaacgaacaatggattta
tataatctaacggtgtcgctgcttgaggagaaatatcaaaatgagaagcaacaatgtcaa
gggttagcaggatccagtgatgactatttcgcgcaattgcccatcttatacggcatagtg
gaaactgacattgaaaaggatattggaaattatgcaacagtcaagaaactttccaagttt
ttccgattcgacctcacgtctttcgaagacgacagtcaaggggacgaagtgtccgaggcc
gagtttagactttaccaggttcctaatgaaatgaaggatactgaacagcaaatcgacctt
tttcaactcataccatcatataacagtacagaggaaccgaccaggagatttttgacaagt
tggactgtatcaaccaccagagaaggatggctcgctcatgacgtcactgatgtcgtcaga
gaatgggtagctgacccagaatcaaaccttggatttgaagtgaatctaaactgtggagac
tatctgcagggacccactactaccacgcctgctgctattacaaaagatcaacataaactg
cacgtcttgtttgcagatccaagaggaacctttccaagtatggacaatggacgtggtgat
ggtaaccctagaggagaaggattccccagtattaatcatcctaggttagttgttatggca
ccagctaaccactcaaagggaggcgaaagcaacagcgtcagacggcgtcgaagcgcttcc
tacagcggttctcagtgcgaccagaactcgcccaactgctgtcttcgcccgctctcgatc
aacttccggcgcgacctgaagtggaactggatccgtcagcctcgtgtctattcaccgaac
ttctgcgcagggtcttgtccctacatcttgagcgcagacacatcccatgcgtcggtcctg
tcgctttacaaacatcttaatccggatgcgagtccctcgccatgctgctcccctcattcc
ttcagacctttaaccatcctattctacaacagaggaagaccggagatcaggcaactcaat
aacatgattatagaatcttgtagatgtagctag
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