Lytechinus variegatus (green sea urchin): 121418273
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Entry
121418273 CDS
T11173
Name
(RefSeq) F-box only protein 11-like isoform X1
KO
K10297
F-box protein 11
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121418273
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121418273
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
DUF4957
Motif
Other DBs
NCBI-GeneID:
121418273
NCBI-ProteinID:
XP_041467985
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Position
7:complement(5293808..5360922)
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AA seq
874 aa
AA seq
DB search
MSTPEKRSSGTTVRRSARLIEKKPSSSLSNELGSNSKIRTSCPHHDQSQQPYSLRRKAST
LCSGRWDLSSSPGSSPMTRAKRSRLSSHTDTQASGGTTGDDNFLESLMPDEILIKILSYL
LEKDLCNVACVCKRFNTLASDLTLWKRLYQSVYELSLPLLRPGPTKFKFVQPDKLDVPNI
WKESFKTLYSAVHVKPGYAAYMHDSPELFKGRDIQYYDTIDEALSSVEGNEYTLILVHEG
VYTGEWLYIDTPVCILGAAPGHIPDSVIVENSKESTFRFIEGCEDAYLGYISIRFNPESN
SNQPHHKHSCVEVDANCSPTIDSCNIRSRSQVGAAVSVSGRRASPTIKNCVISDCENVGL
FINDHAEGLYLDNEISGNALAGIWVKNYANPIIRRSHIHHGRDVGVFTFDNGMGYFDRCD
IHHNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHENGRGEFIENKIHSNTFAGVWVTSN
SDPTIRGNEIFNGHQGGVYIFGEGRGLIEHNDIHSNALAGIQIRTNSNPIIRNNRIHDGQ
HGGIYVHEKGKGLIIENEVYSNTLAGVWVTTGSCPELRRNRIHSGKQVGVYFYDNGHGTL
EDNDIFNHMYSGVQIRTGSNPIIKRNKIWGGQNGGILVYNGGLGVLERNEIFDNAMAGVW
IKTDSNPHLRYNKIHDGRDGGICIFNGGRGILEENEIFRNTQAGVLISSQSHPRLKRNKI
FDGMAAGIEITNNANAYLEGNLVFNNKFAGICLATGVNPEMKDNKVHGNKNAIEKAVKCG
RCLYKISSYTSYPMHDFYRCKTCNTTDRNAICVNCIRRCHAGHDVEFVTHDRFFCDCGAG
TLSLQCQLAGEPTKDTDTLYDSAAPIESHTLMVN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcctgagaaaagatcatctggaactacagtgagaagatcagcacgattgatt
gagaagaaaccaagcagttctttgtcgaatgaattaggcagcaactccaaaatccgcaca
tcttgcccgcaccacgaccaatcacagcagccctacagcctgaggcgaaaggcatcaact
ctgtgctctggcagatgggacttgagttcatcacctgggtcatctcccatgacgagagca
aagagatcaaggctttccagtcacacagacactcaagcatcaggagggacgacaggagat
gacaatttcctggagtcgttgatgccagatgagatcctcatcaaaatcctttcctacctc
ctagagaaggatctatgcaatgtggcatgtgtatgtaagaggttcaacacccttgccagc
gatctcactctatggaaacgtttgtaccagtctgtatatgagctatctcttccccttctg
cgaccagggccaaccaaattcaaatttgtccaaccagacaagctagatgtgccaaacata
tggaaagagagttttaaaactttgtactcagctgtccacgtcaagccaggctatgccgcc
tacatgcatgattctcctgaactattcaagggccgtgatatccagtactacgacacgata
gacgaggcactgtcatcggtggagggtaacgaatacaccctgatcttggttcacgagggt
gtttacaccggagagtggctgtacatagacacacccgtctgtatattaggagctgctcct
ggtcacattccagacagcgtgattgttgagaacagtaaagagtctacgtttaggttcatt
gaaggatgtgaagatgcatatcttggttatattagtattaggtttaatcccgaaagcaac
tccaatcaaccacatcacaagcactcatgtgtagaggttgatgccaactgctcgccaacc
atcgatagctgtaatataaggagtagatcacaagtgggtgctgcagtaagtgtgagcggc
aggagagcgtcacctaccatcaagaactgcgtcatcagcgattgtgaaaatgtgggactc
ttcatcaacgaccatgcagagggtctctaccttgacaacgagatcagtggtaatgcattg
gcagggatctgggtgaagaactatgcaaaccctatcatcaggcgtagtcacattcaccac
ggtagagatgtgggtgtcttcacattcgataatggcatgggttactttgaccggtgcgac
atccatcacaatcgtatcgcgggctttgaggtgaaggccggagctaacccaaccgtcgtt
cattgtgagatccaccacggtcagaccggtggcatctacgtacatgaaaacggtagagga
gagttcatagagaataaaatccattccaatacctttgctggagtctgggtgacgtccaac
agcgatccaacgatacggggcaatgaaatattcaatggtcaccagggaggcgtgtacata
tttggagaggggcgtggcctgatcgagcacaacgacattcacagtaacgcactggcagga
atccagattcgcactaacagcaatcccatcattaggaataatcgtattcatgacggtcaa
catggcggcatctatgtgcatgagaaaggtaaggggttaatcatagagaacgaggtttac
agcaacacattggctggtgtatgggttactacaggtagctgtccggagcttagaagaaac
agaatccacagtggtaaacaggttggtgtgtacttctatgacaacggccacggtacgctg
gaagataatgatatcttcaatcacatgtactccggtgttcagatcaggaccggtagcaat
cccatcatcaagaggaataagatctggggaggtcagaatggtggtatcctcgtctataat
ggaggtcttggtgtattagagcgtaatgagatctttgacaatgccatggctggtgtgtgg
atcaagacggacagcaatcctcatcttcgttacaacaagatccacgacggtcgggatggt
ggtatctgtatattcaatggtggtagaggaatcctggaagagaatgagatcttccgcaac
acgcaagcgggtgtcctgatcagctcccagagccatcccaggctaaagcggaataagatc
tttgatggcatggcagcggggatcgagattaccaacaatgctaatgcctacctggaggga
aaccttgtcttcaacaataagtttgccgggatctgtctcgctacaggtgtcaatccagaa
atgaaagataacaaggtgcacggtaataagaatgccattgagaaagctgtcaagtgtgga
aggtgcctgtacaaaatctccagctatacaagctatcccatgcatgacttctacaggtgt
aaaacgtgtaacacgacagacaggaatgccatttgtgtgaactgtatcaggaggtgtcat
gctggtcatgacgtggaatttgtcacgcatgataggtttttctgtgattgcggagctgga
acattgtcattgcaatgccaactcgcgggagaaccaaccaaggacacggataccctatac
gactcagcagcgcccatcgaatcacacacactcatggtcaactga
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