KEGG   Lytechinus variegatus (green sea urchin): 121418277
Entry
121418277         CDS       T11173                                 
Name
(RefSeq) protein PRRC2C-like
  KO
K12829  splicing factor 3B subunit 2
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121418277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lvg03041]
    121418277
Spliceosome [BR:lvg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121418277
 Complex B
    121418277
 Complex C
   U2 SnRNP specific factors
    121418277
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 121418277
NCBI-ProteinID: XP_041467990
LinkDB
Position
7:complement(5400663..5427976)
AA seq 1484 aa
MAITITEIKKLRVADLRARLSELGLPINGLKAELVDRLYSYYQQQSIEEQQQQLGGQHDE
FANMFQADRMGEPPSLHSPPVQPPRMDFVQATNEPQSFPQQTPPSQQQSMQMPSLAHMQA
PQMHSSQMQPQMQQPSMHSQQMQQQQQHPQMQRSQMQHPSMQSPHMHSSQMQPPAMHSSQ
LQLPPMQPQQMQARGMELPQMQPSQMQSLQMEPPQLQPLQMEPPQLQPLQMDPPQMQSLQ
MDPPQMQSLQMDPPQMQSLQMDPPQMQSLQMDPPQMQSLQMDPPHLQPPQMQSRMEPHQR
QPPQMEPPQMDPPQMQSQRMEASQMQSHRMESSQMQPQQMEPPQIESPQMQSRPMEPPQL
QPHQMERPPMQSHQMESPAIPSSQRNTSSMQMSQMQSHHMQPEMQQPRTQPPPMQSTQMQ
QSQLQPPPVPPVQPPSMQSTSFQPPPAPFHRSDSPPPIMQNQQAFPPPPPQPPKPPHLLL
QGEQTSTNMPTQQPPTMPIPPPPAPPTQSPVSSQPPSLEPPNLPMQLPNLGAMQPPPIPP
PPPPPMSLAQMPAPPPVMPADTSTPTPKQMTGAEMMEIRHVQEREKQEREKAEVAEVARI
AEEQQELIEREKQRILQQQQERIRQRQEQQRLEDEQKMQKAMQQQKMLEEQRKARELDEE
TRQKVVQQQILIEHQRVVEETMKEADLLRDQQRALAVQREEEVKIRKQQEMLEIEAAQHR
EQQQKANMSGLLPIPTSGAPSQPRMQPEMERPPRPTGRLETPVGQGIRGPRPGFQPGPMD
HRGPHERHRMPLRDGRGPGPDSRPMMGRDRFERMPPHLMMDKGHPPPLLDDGGLSKMDDD
LAKDIKVPQAMEKVFAFKDKRAQQIGSNIDEAVKEEFFPPAEDEVSDDEADNEEEEEEEE
QEEKDKKKVQSNNQKMSKNRRRKLKKKKRKAAKRAEKEEAAAENRVRKEDEEKKGKKKEE
KVEVEYVPEKIEVIDPAFRQFQRIFQAFQLSEPMKPEVKELEKETPKQPEKQKEKEKDSD
EDSDDDSDMEEEDDGKPKISKKKLRKLNRLSVAELKQLVTRPDVVEMHDVTARDPKLLVY
LKAYRNTVGVPRHWCFKRKYLQGKRGIIKPPFELPEFIQRTGIMEMRQALQEKEEQQTMK
TKMRQKVRPKMGKIDIDYQKLHDAFFRWQTKPKLTIHGDLYYEGKEFETKLKEKKPGELS
EELRTALGMPTGANADKYPPPWLIAMQRYGPPPSYPHLKIQGLNAPIPESCSFGYHAGGW
GKPPVDQSGKPLYGNVFGTDAADLKAEEEEEIDRTRWGELESESEESSSEEESEEEREPG
EIDETGLITPADGGLITPSGLTSIPTGMETPDMIELRKKKIEDAMEQGAETPQLYTVIQE
KKTNVGAAMVGSTHVYDLPPAGVKKPTGTASEGVAIALDPSELDMDTEAMTAKYEEQVRE
QQSQLEKEDFSDMVAEHAAKQKNKRKKQTQDSGRAPKKYKEFKF
NT seq 4455 nt   +upstreamnt  +downstreamnt
atggctattaccatcactgaaataaagaagttgagggtagccgatttgagagcaaggtta
tcagagcttggcctgcctattaatggattaaaagcagagcttgtggatagattgtactct
tattatcaacaacaaagtatagaagagcagcaacaacaacttggaggacagcatgatgag
tttgccaacatgttccaagcagacaggatgggagaacccccttctttgcattcccctccg
gtccaaccacccagaatggattttgtacaggcaaccaatgagccccaatcattcccccaa
cagacaccaccatcacagcagcagagcatgcagatgccttctttagcccacatgcaagcg
ccccagatgcattcatcacagatgcagcctcagatgcagcagccctcgatgcattcccag
cagatgcagcagcagcagcagcatccacagatgcagcgttctcaaatgcaacatccctcc
atgcagtcgcctcatatgcattcttcccaaatgcaaccccctgcaatgcattcttcccag
ttgcagcttccccccatgcagccccaacaaatgcaggcccggggaatggagctccctcag
atgcagccctcacagatgcagtcccttcaaatggagcccccacagttgcagccccttcaa
atggagcctccacaattgcagccccttcaaatggacccccctcaaatgcaatcacttcaa
atggacccccctcaaatgcagtcccttcaaatggacccccctcaaatgcagtcccttcaa
atggacccccctcaaatgcagtcacttcaaatggacccccctcaaatgcagtcccttcaa
atggacccccctcatctgcagcctcctcaaatgcaatctaggatggaacctcatcaaaga
caaccccctcaaatggaaccccctcagatggacccccctcaaatgcaatcccaacgaatg
gaagcatctcaaatgcagtctcatcgaatggaatcttctcaaatgcagcctcagcaaatg
gagccgccacaaatagaatcccctcaaatgcagtctcgtccaatggagcctcctcagctt
cagccacatcaaatggagcgtcctccaatgcagtcccatcagatggaatcccctgctatt
ccctcttcccaaaggaatacctcttccatgcagatgtctcaaatgcagtcacatcatatg
cagcctgaaatgcagcaacctcggacgcagcctccgcccatgcagtctactcagatgcaa
cagtctcagttgcagcctcctcctgtaccaccagtacagcctccttccatgcagtcaact
tctttccagccacctccggcaccttttcacagatccgactctccaccacccatcatgcag
aaccaacaggcatttccccctcctccaccgcaacctccaaaacctccacacttgcttctc
caaggtgagcagacgtccacaaatatgcccactcagcaaccacctacaatgccaatccct
ccacctccagcacccccaacccagtcaccagtaagttcccagccaccctctttagagcca
cctaatttacccatgcaattgcctaacttgggggcaatgcaaccccctcctattccccca
cctccaccaccacctatgtcgttagcccagatgccagcacctccacccgtgatgccagcc
gacacttcaacaccaactccaaagcaaatgacgggggcggagatgatggagatacgacat
gtgcaggagcgggagaagcaagaaagagagaaagcagaggttgctgaagtcgctcgtatt
gcagaagaacagcaagagctgattgagagggagaagcagaggatccttcaacaacaacag
gagcgtataagacaaagacaggagcagcagagactggaggatgaacagaagatgcagaaa
gcaatgcagcagcagaagatgttagaagaacaacgcaaggctagagaacttgatgaagag
acaagacagaaagttgtccaacaacagatccttattgagcatcagcgtgtcgtagaggaa
actatgaaagaagcagatctccttcgggatcaacaaagggctcttgctgttcaaagagaa
gaggaagtcaagatcagaaaacaacaagaaatgctggagattgaggctgcacaacacagg
gaacaacagcaaaaagccaatatgagtgggttattacctatcccaacctctggggctcca
agccagcctcgtatgcagccagagatggaaaggccacctcgccccactggacgactagag
acgccggtgggccaaggcatccgaggaccaaggccagggtttcaaccgggtcccatggat
cacaggggaccgcacgagaggcatcggatgccactacgtgatggcaggggaccaggaccc
gactcaaggcccatgatgggaagggaccgattcgagaggatgcctcctcatctgatgatg
gacaaggggcatccaccacctctcttagatgatggcgggctttcaaagatggatgacgat
ctagccaaggacatcaaagtcccacaagccatggagaaggtgtttgctttcaaggataag
agagcccagcagattggatcaaacatcgatgaagctgtaaaagaagagttcttcccacca
gcagaagacgaggtatctgatgatgaagctgataatgaagaggaagaagaagaggaggaa
caggaggagaaagacaaaaagaaggtccagtccaataatcagaaaatgtcaaagaacaga
cggagaaagctgaagaagaaaaagagaaaagcggcaaagcgggcagagaaggaagaagct
gcagccgagaatagagtaaggaaggaggatgaagagaagaaaggcaagaagaaggaagaa
aaggtggaagtggaatatgtcccagagaaaattgaagtaattgatccagcgttcagacag
ttccaacggatattccaagcattccagctctctgaaccaatgaagccggaagtgaaggag
ctggagaaggagacacccaaacaacctgagaagcagaaagagaaggagaaggattccgat
gaggattccgatgatgatagtgatatggaggaagaggatgatggaaaacccaagatttcc
aagaagaagttgcgtaagctgaatcgtctgagtgttgctgagctgaagcaactggtgacc
agaccagacgttgttgagatgcacgatgtcactgctagggatcctaaacttcttgtctac
ctcaaggcatatagaaatacagtaggcgtacctaggcattggtgtttcaagcgcaagtat
ttacagggtaagagaggaatcatcaaacctccctttgaactgccagagttcatccaaagg
acaggcattatggaaatgagacaggcccttcaggaaaaggaagaacaacaaacaatgaag
acaaagatgcgacagaaagttcgacctaagatgggcaagatcgacattgattatcagaaa
ctccatgatgccttcttcagatggcagacaaagcccaagctgaccatacacggtgacctc
tactatgaagggaaagaatttgaaaccaaactgaaagagaagaaaccgggagagcttagt
gaggagctgaggacagctcttggcatgccaacaggggctaatgctgacaagtacccccca
ccctggttgattgccatgcaacgctatggacccccgccctcatatcctcatctaaagatt
cagggactcaatgcccctatccctgagagttgttcatttggttatcatgctggaggatgg
gggaaaccccctgttgatcagagcggcaaacctctctatggaaatgtctttggcacagat
gcagccgacctcaaggccgaggaagaagaagagattgacagaacgagatggggagagctg
gagagtgaatctgaagaatcatcatcagaagaggagagtgaagaagagagagagcctgga
gagatagatgaaactggtcttattactcctgctgatggtggattgatcacgcctagtggc
ctgacctctattcctactggtatggagacaccagacatgatagagctacgtaagaagaag
atagaagacgccatggagcagggcgccgagactcctcagttgtacactgttatccaagag
aagaagaccaacgttggagctgccatggttggctctactcatgtttatgatcttcctccc
gctggtgtgaagaagccaacaggaacagccagtgaaggggtagctattgccttggatcca
agcgagttggacatggacacggaagctatgacagccaagtacgaggagcaagtcagagaa
caacagagccaacttgagaaggaggacttcagtgacatggtagctgaacatgcagctaaa
caaaagaacaagcgtaagaagcagacccaggacagtggaagggcacccaagaaatacaag
gaattcaaattctga

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