Lytechinus variegatus (green sea urchin): 121418305
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Entry
121418305 CDS
T11173
Name
(RefSeq) nucleoporin NUP42-like isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121418305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121418305
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121418305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
Myosin_tail_1
Motif
Other DBs
NCBI-GeneID:
121418305
NCBI-ProteinID:
XP_041468029
LinkDB
All DBs
Position
1:complement(58695003..58704984)
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AA seq
465 aa
AA seq
DB search
MPVCRYFQQGNCRFGDRCRYEHPRNQSGFGNQGSFRGGGGGGGGGSQSQYKWSSSNYGTQ
QHYGTQQHYGTQQHYGSQQQRGQGSRDLFSGGGGGGGDGSWGNRGSHGQGGYQGGGRGSW
AGGGSNRDGGFRGGGGGKQVNFKDSFNTFQGNKFGALADQGSRDDRSNQAHGNTQDVSAQ
EIMDGILYDMEEWESGKMWPFSCYGPNKSKSCLAGLEDLSQEELRFLAYTAEKAKQFDQY
RAACTTAMDAVKNKRNQLKKPSQSMKNQLVDMYKGASDKNPFAEANPTNIFGNSVPSLTD
IFGANLANIKVASDSSTSTGTMFGKQPSTGSSLLGVSPGAAESAPAAPSSSSLFNRTQGP
TQPVFGGAVGKSDTPAPAFGSAPSSSASSASSVFGSGSQTSVGSGTGLFGKGPSTPTVDP
QQQKAESRTYTPMASLTPEEKEQFEAPIFTLGKVPTRPPPIELVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttgtcgttattttcaacaaggaaactgtcgatttggtgatagatgtcgatat
gagcatcctagaaatcagtcagggtttggcaaccaaggcagtttcagaggtggcggagga
ggaggagggggaggatcccagtcacagtataaatggagcagctcaaactatggtacccag
caacactatggtacccagcaacactatggtacccaacaacactatggtagccagcaacag
aggggtcaaggatccagggatctcttttcaggaggaggaggaggaggtggagatggatcg
tgggggaacagagggagccatggtcagggaggctaccaaggaggaggcaggggatcttgg
gctggaggtggatcaaaccgtgatggggggtttaggggaggaggagggggaaaacaagtg
aattttaaagattcattcaacaccttccagggaaataagttcggagcgcttgctgaccaa
ggctcaagggacgataggagcaaccaggcacatggtaacacacaagatgtctctgcccag
gagattatggatggtattctctatgacatggaggaatgggagagtgggaagatgtggcct
tttagctgttacggacctaacaaatcaaagtcttgcttggcaggtctggaggatttatcc
caggaggagcttcgattcttagcgtacaccgcagagaaagctaagcagtttgaccaatat
agggcagcctgtactacagctatggatgcagtgaagaataaaaggaaccagcttaagaag
ccttcccagtccatgaagaaccaattggtggacatgtataaaggagcatctgataagaat
ccatttgcagaagccaacccaactaatatctttggtaacagtgtcccgtccctaactgac
atcttcggtgccaaccttgccaacatcaaagtggcgtcagattccagcacaagtacagga
acaatgtttgggaagcaaccatcaacaggttcatctcttctaggtgtctcacctggggca
gcagaaagcgcacctgctgcgccaagtagctcttcactctttaacagaactcaaggtccc
acccaacctgtctttggtggtgcagttgggaaatcagatacaccagcccctgcctttgga
tcagcgccatccagtagtgcttcttccgcttcatcggtcttcggatcggggtcacagacc
tctgtaggatccggtacaggtttgtttggtaaaggaccatcgactccaactgtagatccc
cagcaacagaaggcagagtctaggacttacaccccaatggcatcattgactcctgaagag
aaggaacagtttgaagcaccgatattcactttagggaaagtacctacaaggccaccgccc
attgaattggtgagatga
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