Lytechinus variegatus (green sea urchin): 121418343
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Entry
121418343 CDS
T11173
Name
(RefSeq) zinc finger FYVE domain-containing protein 1-like
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121418343
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lvg01009
]
121418343
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121418343
03029 Mitochondrial biogenesis [BR:
lvg03029
]
121418343
Protein phosphatases and associated proteins [BR:
lvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121418343
Membrane trafficking [BR:
lvg04131
]
Autophagy
Other autophagy associated proteins
Others
121418343
Mitochondrial biogenesis [BR:
lvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121418343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
zf-B_box
ANCHR-like_BBOX
GBP
MMR_HSR1
AIG1
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
121418343
NCBI-ProteinID:
XP_041468091
LinkDB
All DBs
Position
7:complement(7642785..7664508)
Genome browser
AA seq
1084 aa
AA seq
DB search
MASRSKTHQPVKYKSKRVCEEKFDCDGSNASYECLNCGTRQCEHCEQLLHKPERPKFASH
IRRKIEQLPCAVECALCPYNPAEFSCLECRTVICQDCNKEYHRGKLTGHRRTPLPKQKQN
KEVASDTTHAQQSPTSEMNPSKSSPENCLPLSPFLDSLSEPTPCEIKERQTTILTGDISS
SSTGLNLIDELTLDSDFHSLTMLDKKPSLSTPDDNDIERDEFLSLESVSSGQGGPKSLEF
LSGHFESLEKPSIAQSNAIAIPKAPESNVNRSAGGCMTVTHRTTRAHGKPGSGRNVNKHG
AGAVHGGHGERVVTSSGNPQGSHPKTEDIQSNQPFLDQTSSPSPRHSEFFRSNSGSGEWT
PSQGQPLSHSLESSGGRKRMEAIVKPVGSVKAVPSSPREKQVESKKKTPSSPQPPPPPVN
ELADLEAAEDEIDLVDPNHAKGFLLVDDSETLQVNSAEALVEKLKCELKTPVKVISIFGN
TGDGKSHTLNHTFFGGQEVFHTSPTQESCTIGVWVAYDERTNIIVVDTEGLLGVSSNENK
RTRLLLKVIAISDVVIYRTRADRLHRDLFQFLGDASKAYLKHFTPELKVTLEKCKIKGPV
STLGPAVIVFHETTHTLPLGAVQPQRSTGGLKSADTLLQERFKEHGCHMDAFSCVQYIGI
QTIKPPTNFKPLKEAILTHVYNSTVRSPRSPQVVYHALKGLNDKFSGAIDREVPSPFPDE
YFTCSTRCLSCNARCTNTMNHIQDNIIHENLSRCKYQHQFDNRVYICKSCYQGGQEVVVV
PKMCSATDNSWMGMIKYAVSGFVLECPHCGVIYRSRQYWYGNQEPEMEAVRTEIRHVWPG
GSTVLQGTHNAGRRLLDGIHQVVDVVSSVSAKPTTMMSQWMMDQIAPPYWRPNAEITACH
RCGKKFDETEKLHHCRECGEGFCDECSQHQLPVPERGWGPKPVRVCDGCFQKKTSDVGGG
KMPAVDDLQAELESAMNDEPQPVMARKVGEVLQTTLGVLGTAVNYPAGMLIEAARPAYWI
PDSEITHCIACKEEFTPKLKIHHCRGCGQGVCVDCSASRRPVPSRGWDMPVRVCSLCNAK
EGQL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcgatctaaaacccatcaacctgtaaaatacaaatctaaacgggtttgtgag
gagaaatttgactgcgacggatcgaatgctagctacgaatgcttgaattgcggaacaaga
cagtgcgaacattgtgagcaacttctgcacaaaccagagagaccaaaatttgcaagtcat
attagacgaaaaattgagcaacttccttgcgctgttgaatgtgccctgtgcccatataac
cctgcagaattttcctgcttggagtgtagaactgtgatttgtcaagactgtaataaggaa
tatcatcgagggaagttaactggacatcgacgcactccgctaccaaaacaaaaacaaaac
aaagaggtggccagtgatacgacacatgcacaacaaagcccgacgagcgagatgaatcca
tcaaaatcttcgccagaaaactgtctgcccctctctccatttctcgattctttgagtgag
ccaacgccatgtgaaatcaaggagaggcaaactacaatcttaactggggatatttcatca
tcttcgactggattaaaccttattgatgagttaacgttggactctgatttccacagtttg
acaatgctggataagaaaccttcgctatctactccggatgacaacgatatagaaagagat
gaatttttgtctttggaaagtgtaagcagtggccagggtggaccgaaatcattggaattt
ctctcgggacactttgagagcttggagaaaccctctattgcacaatcgaatgcaatagcc
atacccaaggctccagagagcaatgtaaacagaagtgcaggtggttgcatgacagtgact
cacagaaccacacgggctcacggcaaacccggaagtggtaggaatgtaaacaaacatggt
gcaggagcggtgcatggtggtcatggggagagagttgtgacatcatcagggaatccccaa
ggcagtcaccccaaaacagaggacattcaaagcaaccaaccatttctggaccagacttcg
tctccaagtccgaggcattctgagttcttcaggtccaattctggctccggggagtggacc
ccttctcagggccaaccgttgtcacacagtttggagagttctggaggccggaagaggatg
gaagcgattgtgaaacctgtagggagtgtgaaggctgtaccatcatcacccagagagaaa
caagtggagagcaaaaagaagactccctcatcaccacaaccaccaccaccaccagtgaat
gagcttgctgacttggaagctgctgaagatgagattgatcttgttgatcctaaccatgcg
aagggctttctacttgttgatgattcagagacacttcaggtaaattcagcagaagcgttg
gtggagaaattaaagtgcgagttgaagacacctgtcaaagtaatctccatctttgggaac
acaggagatggtaaatctcacaccctcaaccacaccttctttggagggcaggaagtgttc
cacacctccccgacccaggagtcctgcaccatcggcgtttgggtagcctacgacgaaaga
accaacatcatcgttgtggacacggaaggcttgctaggggtatccagcaacgagaacaaa
cgcaccagactcctgctgaaggtgatagccatctccgacgtcgtcatctatcgcacgagg
gccgataggctgcaccgagatctcttccagtttctgggcgatgcgtcaaaggcatacctg
aaacatttcactccagagctgaaagtgactttggagaagtgtaaaattaaaggacccgtg
tcgaccctcggaccagcagtgatcgttttccatgaaactactcatacattaccactagga
gctgttcaaccacagagaagcactggagggctcaagtcggcggatactctcctccaggag
cgcttcaaggagcacgggtgccacatggatgccttcagctgtgtccagtacattggtatc
cagaccatcaagcctccgaccaacttcaagcccctgaaagaggccatcctgacccatgtt
tacaacagcaccgttcggtcaccgaggtcaccccaagttgtataccacgcactgaagggc
ctgaatgataagttcagtggtgcaatcgaccgtgaggttccatctccgttccccgacgag
tacttcacctgttccacccgatgcctctcctgcaacgctcgttgtactaacaccatgaac
cacatccaggataacatcatacatgagaacctgtcgcgctgtaaatatcagcatcagttt
gataacagggtctacatatgcaagagctgctatcagggtgggcaagaggtagtagtagta
ccaaagatgtgttcagctaccgataactcctggatgggcatgatcaaatatgcagtctcg
gggtttgtgttggaatgtccccactgtggtgttatctatcgtagccggcagtattggtat
ggcaaccaggaaccggagatggaagcagtcagaacagagattcgacatgtttggcctggg
ggtagtacagtgctgcaagggactcacaacgcagggcgacgcctgctggatggaatacac
caggtagtggatgtagtcagcagtgtcagtgctaaacctacaactatgatgtcacaatgg
atgatggatcagatcgcgcctccgtactggagaccaaatgctgagatcacggcctgccat
agatgcggcaagaagtttgacgagacggagaagttacatcactgcagggaatgcggggag
ggattctgtgacgagtgctcacagcatcagctaccggtcccggagagaggctggggaccc
aagcctgtcagggtctgtgatggatgctttcaaaagaagacatcggatgttggtggtggg
aagatgcctgcagtggatgatctccaagccgagttagagagtgcaatgaatgatgagccg
cagccggtcatggccaggaaggtcggagaggtcctccagacaaccttgggtgtcctcgga
actgcagtcaactaccctgcaggtatgttgatcgaggctgccaggccggcatactggatc
cctgacagcgagatcacacactgcatagcctgcaaggaggagttcacccccaagctgaag
atccaccactgcagaggctgcgggcaaggtgtgtgcgtcgactgctccgcgagcaggcga
ccggtgccctctagaggctgggacatgccagtcagggtgtgcagcctgtgcaatgccaag
gaaggacaactctga
DBGET
integrated database retrieval system
