Lytechinus variegatus (green sea urchin): 121418354
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Entry
121418354 CDS
T11173
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121418354
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121418354
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GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121418354
NCBI-ProteinID:
XP_041468108
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Position
7:complement(8096454..8149146)
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AA seq
908 aa
AA seq
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MDCLYCDIPRALFSPALDTSVIAAIRKERSRDAARSRRGKENYEFYELAKLLPLPAAITS
QLDKASIIRLTIGYLHMRHFCIQGDPPWHNYPENISTPTNSSRHLSVLQGRYPHVQSGTN
AIAREVYEHHLGSHILQSLDGFLFALYRDGRFLYISETVSIYLGLSQVELMGCSVFDYVH
PGDHAELAEQLGMKLPPNKTSSSPSSANADGNSTSGSAAGSPAAIGPSTIQDDVTLNMTA
TSDRMERSFLIRMKSTLTKRGVHFKSSGYKVIHVTGALRPEISLSQYNHHPPNVLGFVGV
GYSLPPPTISEVRLDPTMFMCKVDLDFTITFCEAKIGDFLDHSADSIIGKSFYSYIHAQD
IANVRSSHQDLLNKGQTITKYYRWMLVEGGYVWIQTTATLCYAKNSNDSSFIFINQVLSH
VEHGNIAMDISQIPSLASDEHIELLGTSPTRNKTSPCRHSGDEADGVSDQQLRIVGDSNN
NSKGHQGLPEGKARKRPQSPERRKSKKQRGAQITRNEPTGNHSDIEHKSEISGRESKRKA
NSRLLAQKPKATPDVIPKQVIIRSDSPNEKTLTVLGERGDFRESEDYAKRSKERLQHTED
VVKEVIEDKGIHHSPPAMSPINHMQASSSLLALSVRNASRHDEEDIVRVPTGSWENPPNR
ELPPDHNGMIPSPDTNHTRLSLAPMNTVPKGVFTTPSPKTPDSLLTPPLSDSAKNQFSLP
PVSSLTSPKARPTNTDSITPIFTTESSISRYISPSSSKHETVYPIPSPLTQNPSVESLDS
MRNMVKQEPSFYNARMLGVPSSYTNMAAYANYGQYNNLQHYNATVNLTSRAYQAAAASYD
ASMYKNYHTTPDLPIDLSYNGVTGIPIMSPANGPYFPAASRLQYNITDGQLSLNCDKTGL
DKSKTPSV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggattgcctatattgtgatattccgcgagcgcttttctccccagcactcgataccagt
gtgatcgctgccatccgtaaagaacgatctcgggatgcggcccggtccaggcgcggcaag
gagaactacgagttctacgagctggccaagcttctcccgcttccggcggccatcaccagc
cagctggacaaggcctccatcatcaggctgaccatcgggtatcttcacatgaggcacttc
tgcatccagggggatcctccttggcacaactacccagagaacatctcgacacctaccaat
tcttccaggcatctctcggtgttacaagggcgttatccacatgtccagtcaggaaccaat
gccattgcaagagaagtgtatgaacaccatctcggaagccatatattacaaagcttagat
ggatttctctttgcattatatagagatggaaggtttctttacatctcggagaccgtctca
atatatctaggactctcacaggtagagttgatgggttgctcagtcttcgactacgtgcat
cccggcgaccacgcggaactggccgaacagctcgggatgaagcttccgcccaataagacg
tcctcgtccccctccagtgccaatgccgatggtaactctaccagtggttccgctgccggt
agtcctgctgcgataggaccatcaaccatccaggatgatgtaactctgaacatgacagca
acatcagacagaatggagagatcattcttaataaggatgaaatcaactcttactaaacga
ggcgtccacttcaaatcttcaggttataaggtgattcatgtaacaggtgccctccgtccc
gagattagtctgtcacagtacaaccaccatcctcccaacgtccttggcttcgtcggtgtt
gggtactctctaccgccccctaccatcagcgaggttcgtctcgaccccaccatgttcatg
tgtaaggtggacctggactttaccattactttctgcgaggccaagattggtgattttctg
gaccactctgcagacagcattattggtaaaagcttctacagttatattcatgctcaggat
attgccaatgtgcgttcaagccaccaagatttactgaacaaaggacagactatcaccaaa
tactaccgttggatgttggtggaaggaggctatgtttggatccaaactacagcaacactc
tgctatgcgaaaaactcaaatgatagctcatttatcttcataaaccaagtccttagtcat
gttgaacatggtaacattgctatggatataagtcagattccatcattagcctctgatgaa
catatagaactcttaggaacatcaccgacaagaaataaaacgtcaccatgccgtcattca
ggagacgaggctgatggagtctcagaccagcagttaagaatagttggggatagcaacaat
aacagcaagggacaccaaggtctgccagagggaaaagcaagaaagcgccctcagagtccc
gaaaggagaaagagtaaaaaacagcgtggtgctcagatcacaaggaatgaacccactggt
aaccatagcgacatagaacataaatctgagataagtgggagagagagcaaaaggaaagct
aattcaagactccttgcacagaagcctaaagccacacccgatgttatccctaagcaagtt
atcatcaggtcggacagtccaaatgaaaagactctgactgtccttggtgagagaggggac
ttcagagagtccgaagactatgctaagaggagtaaagagcgattgcaacatactgaagac
gtcgtcaaggaagtgatcgaggacaaagggatccatcattcaccaccggcaatgtctcct
ataaatcacatgcaggcttcatcttccttgttagctcttagtgtcaggaatgcaagcagg
cacgatgaagaagatattgtccgggtgccaacaggaagctgggagaaccctccaaatcga
gaactgcctccggatcataacggaatgatcccatcaccggacactaatcacacccgtctc
agtctggcccctatgaacacagtgcccaagggggtctttaccacccccagtcccaagact
cctgactctcttcttacccctcctctatcagactcggccaagaatcagttctctctgcct
cctgtaagctcactgacatcgcccaaagccagaccaacaaacactgacagtattacccca
atcttcaccaccgagagttcaatcagtcgatatatatcaccatctagcagcaagcacgag
acggtgtatccaatcccttcgccgttgacccagaacccatctgtagaaagcttagactcc
atgagaaacatggtcaaacaggaacccagtttctacaacgctcgtatgttgggcgtgcca
tcatcttacaccaacatggctgcgtatgccaactatggacagtacaataatcttcaacat
tacaacgctaccgtgaacctgacatccagggcctatcaagccgctgcagccagttatgat
gcttctatgtacaagaactaccataccacccctgatctacccatagatctatcgtataac
ggtgtgacaggtatccctatcatgtcgccagctaatggaccatacttcccagccgcttct
agactccaatacaacatcacagacggacagctcagcttgaactgtgacaagacgggactg
gacaaatcaaagacaccatcggtttag
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