Lytechinus variegatus (green sea urchin): 121418499
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Entry
121418499 CDS
T11173
Name
(RefSeq) poly(A) polymerase beta-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121418499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121418499
Enzymes [BR:
lvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121418499
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121418499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
121418499
NCBI-ProteinID:
XP_041468341
LinkDB
All DBs
Position
7:complement(14096655..14118116)
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AA seq
812 aa
AA seq
DB search
MSTAASAESSTKKTYGITSAISMVGPRPEDIRQTKELVEALKPHGVFENEEELNHRLIVL
GKLDQIVKDWIRQVAEDKNIPPNIADTVGGKIYTFGSYRLGVHTKGADIDTLCVAPLHVE
RNDFFKSFYDIVKGLPETKDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLT
DDSLLRNLDPKCVRSLNGCRVTDEILNVVPNKENFRLTLRTIKLWAKKKGVYSNALGFLG
GVSWAMLVARTCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTDLGFPEWDPRV
NVSDRFHLMPIITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFEP
SNFFQKYKHYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKLAHVYPKSISPS
SPAEGAEEEKTDEHSTLWFIGLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGM
KIEAKHVKRKKLSEYVPASMLKSKKKSLPSTDGSSRGNTPKNSSSDAASRLTPSPLNKTG
DSISEDEFLYGPNVSSPALISSLDVRGRDSPSASSIESDFGAGNAGTGDGGTEPSQDTVF
QSPKSSRTKPSTDQASTDTDGDGPNTQPSSQEEQAPSGDTAQIPTIKVTAPDEETQEPCI
KASGDDSQTFKRPSSPPPVSESPSKKVRTDNGVVLPEAQQEEGDSEVKESGVGEEDDDTQ
TFKRPSSPVPVIESPPKKMKTDNGIKAGGEPAPLTSDCNENGESEDNTSPQTLPRLVIRQ
RVPSGELPDIASPVPVAPKAQKNTIRLNLNVK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagcagcgagtgcagagtcttcaaccaagaagacctatggcatcacatcagct
atcagtatggttggaccacgacctgaagatatcagacagacaaaggagttagtagaagct
cttaagccccatggtgtctttgaaaatgaagaagagcttaaccacaggttgatagtactg
gggaagctggatcagattgttaaagattggatcagacaagtggcagaggataaaaacatt
ccaccaaacatagcagataccgttggaggaaagatctacacatttgggtcttatcgacta
ggagtacatacgaaaggtgctgatatagatactttatgcgtagcccctcttcatgtagag
aggaatgatttcttcaagtctttctatgacattgtcaaaggattgccagaaaccaaggat
tgcagagctgttgaggaagcatttgttcctgtcatcaaactagtctttgatggcatagag
atggatatcttgtttgctcgcctggccctccgagttgtaccagagaacctagatctaacg
gatgattccctgcttaggaacttagatccaaagtgtgtccgtagtttgaatggttgtcgt
gttacagatgaaattctgaatgtagtcccgaacaaagagaatttcaggctgacgctgaga
acgataaaactgtgggccaaaaagaaaggtgtgtattccaatgctcttggtttccttggt
ggtgtgtcatgggctatgttagtagcaagaacctgtcagctttaccctaatgctgcagca
tcgacactcgtcaacaagtttttccttgtcttcacaaagtgggcatggccgcagcctgtg
ttactcaaacctccaaacacctcaacagatctcggctttccagaatgggatccaagggtg
aacgtcagtgacagatttcacttaatgcctatcatcacaccagcctaccctcaacaaaat
tccacatacaatgtttcacaatctacgaagacagtcatagagcaagaactccaaggcggc
ctagctatcactcaggaaattatgcaaggcaaagcaacatgggagaaactctttgagcct
tccaacttcttccagaagtacaagcactacatcgtcctgatagccagtgcaggaaatgaa
gatgatcacctcaaatgggttggactggtggagtctaagatcagagtattggttggtaac
ttagagaggaatcctcacatcaaactagcccatgtctaccccaagtctatctcacccagc
tctcctgcagaaggagcagaagaagaaaaaactgatgagcattccaccctgtggttcata
ggcttagagttccagcctctaggtccagcaaccaatgtcaacctgaccctagatatacag
ttctttgtcaataccgtccataggcactcagtcaccatcaagctgctacaggaaggcatg
aagattgaggccaagcatgtcaagaggaaaaagctaagcgagtatgtaccagccagcatg
ctcaagtctaagaagaaatccctgccatccacagatggaagcagtcgaggcaacactccc
aagaactcttcctcggatgcagcctcccgtctcaccccctcacccctcaacaagacggga
gacagtatcagtgaagatgagttcctctacggacccaacgtcagctctccagccctcatt
tccagccttgatgtcagggggagggatagtcccagtgccagctccatagagtcagacttt
ggtgccggcaacgcaggaacgggggacggagggacagaaccgtctcaggatactgttttc
cagtcacccaagtcaagtagaaccaagccgtcaacagaccaagccagtactgatactgat
ggcgatggaccaaatacacaaccctcatctcaggaagagcaagcccctagcggagacacc
gctcaaataccgaccatcaaggtcaccgctccagacgaagagacacaggaaccttgtata
aaagcatcgggggacgattcacagacattcaaacgcccctcgtccccgcctcccgtttcg
gagtccccctcaaagaaagtccggactgacaatggcgtcgtgctcccagaagcacagcag
gaagagggtgatagtgaagtgaaggagtcaggggtgggcgaggaggatgatgacacgcaa
acattcaagagaccgtcgtctcccgtcccggtcatagagtcacctcctaagaagatgaag
actgataacgggatcaaggctggaggagagcctgcacctctcacttcagactgcaatgag
aatggagaaagtgaagataatacaagtcctcaaacactacctcgcttagtcatacggcag
agagtacccagcggagagcttcctgatatagcatcccccgtccccgtcgcccccaaagca
caaaagaacacgataagactgaacttgaatgtaaaatga
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