Lytechinus variegatus (green sea urchin): 121418797
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Entry
121418797 CDS
T11173
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121418797
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121418797
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
121418797
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121418797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_18
AAA_17
KTI12
Zeta_toxin
nSTAND3
HeH
Motif
Other DBs
NCBI-GeneID:
121418797
NCBI-ProteinID:
XP_041468871
LinkDB
All DBs
Position
7:23456182..23480076
Genome browser
AA seq
983 aa
AA seq
DB search
MSEIEPSKLKVAELRAELQARGLDSKGVKAVLVDRLENALLAEAEEVGNENEPAEAEEDD
NFDEDVVELAQEALPEAEQGFGDEFGFSGDQDGTSQEADDLLQAGEEGGDDQLLADLEIP
PAMEEPEAEVEPEPQEEAMVQEEDAMPQVTEGEPEATNEQEQVEQPPESMEQEAQPQTEE
KEGENKEQSGDGDKKEEGDKDKERKRDYENRNRDRRFGGRDRSPRRRTPPPVVMEEDDDI
PDTQCVLSKYLSDLNLKIGKDGYNACPLSMEGFAYMWGGVKATHGVNKGKIGYECKLESQ
ADVRHLPPEETNRHVVRVGWSIDASSLQLGEEDFSYGYGGTGKASVKCKFDNYGEKFGVG
DVIGAYVDFEGEKPTISYTKNGNDLGVAFTIEEDLEGKALFPHVMVKNISVEVNFGQKEE
PYFPLKEGFSFIGKLPAEDSVRGPKPPATKKDCENVAVLVGFLGEWSPCIIPASHIVEGT
TIQHTFVTVVWEGSLLRGKVLSVLRSADDVEMLVQYLPCPVSPEYKNKLLMMVGLPGSGK
TTWTIQACKDMTDKKYYILGTNLIMDKMKVMGLRRQRNYAGRWDKLMDLATKCLNRFFEV
AARKRRNYILDQTNVYPSARRRKMRPFEGFSTKAIVLVPTDEEFKKRVEKRTKEEGKDVP
DHAVNEMKANFELPEKGVLFDEVEYVELSEEECKPLVERYRKEGKDAGGLKPRFDRRGGR
DFRGGYDRGGYGRHDDRRGGYGGGGGYRSGGYDHGDRRGGYGGGGGYRGGYREGGWNRGG
GGYGGGRGGGYGGSGGYGGGRGGGGYNSGGYGSGSSSYSNRGSSNYGSGSSNYNRNSSSG
GYGNQSSGGSYGNRQNQGSYNKYGNQSNYQQNRQSNYNQQSSYGSGSGSSNYSSNQGYGS
SSNYGNTSGYGNNSNTSSYNQGSQSSYNQGYQQNQQSQQQTQQQYANYQQQYQQYYQQNP
QYAQQYAQYYSNYGNYGGSGSSQ
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagattgaaccatccaaattgaaggtcgcggagcttcgcgcggaactgcaagcg
cgtggacttgattcaaagggagtgaaagctgtccttgttgatcgacttgagaatgctttg
cttgccgaagccgaggaagtagggaatgagaacgaacctgcggaagcagaagaggatgac
aattttgacgaagatgttgtagaactagcacaagaagcactaccagaagcagagcaagga
tttggtgatgaatttggattttcaggggatcaggatggaaccagccaagaagcagacgat
ctcttgcaagcaggtgaagagggtggagatgaccaactcttggcagacttggaaattcct
ccagctatggaggaaccggaagcagaagtagagccagaaccgcaagaagaagctatggtg
caagaggaggatgctatgcctcaagttacagaaggtgaaccagaagcaacgaatgaacag
gagcaggttgaacagccaccagaaagcatggagcaagaagcccaaccacaaacagaagag
aaggaaggtgaaaataaagagcagtctggagatggagacaagaaagaagaaggtgacaag
gataaagaaaggaagcgcgactatgagaacaggaaccgtgatcgccgatttggaggcaga
gatagatctcccaggagaagaacgccccctcctgtggttatggaagaagatgatgatata
ccagatacacagtgtgtgctcagcaaatacctgtctgacttgaatctaaaaattggcaaa
gatggctacaatgcttgtcccctcagcatggaaggattcgcatacatgtggggtggagtc
aaggctacacatggtgtgaataaagggaaaatcggatatgaatgcaagctggagtcccaa
gctgatgtgcgccatctacctcctgaagagaccaacagacatgttgtccgtgtaggatgg
tccattgatgcatcttctcttcagttgggagaggaagacttttcttatgggtatggagga
acaggaaaggcatcggtcaaatgcaagtttgataactatggagagaagtttggtgtggga
gatgttatcggtgcatatgtggactttgaaggagagaagccgacaatctcatacaccaag
aatggcaatgaccttggtgttgccttcaccattgaagaagacctagaaggcaaagccttg
ttccctcatgtcatggtcaagaatatctcagtggaggtcaactttggccagaaggaggag
ccttattttccattgaaggaagggttctctttcattggtaagctacctgctgaggactct
gtacgtgggcctaaacctcctgcaaccaagaaggattgtgagaatgttgcagtacttgta
ggttttcttggtgaatggagcccctgtatcataccagctagtcatatcgtggaaggaaca
actatccagcatacatttgttactgttgtgtgggaaggatctcttcttcgtgggaaagtg
ctgtctgttctacgaagtgcagatgatgttgagatgctggtccagtatctaccatgtcct
gtctcaccagaatacaagaacaagctgttgatgatggttggtctgccaggctctggtaag
acaacatggaccatccaggcttgcaaggatatgactgacaagaaatactacatccttggc
accaatctcatcatggataagatgaaggtgatggggctccgccgtcagcgtaactatgcc
ggtcgttgggacaagttgatggacttggctaccaagtgtttgaatcgattctttgaagtt
gcagcccgaaagcgccgtaattacattcttgaccagacaaatgtgtatccctccgcaaga
agaagaaaaatgcgcccttttgagggtttcagcaccaaagcaatcgtattagttcccact
gatgaagagtttaagaagcgggtggaaaaacgcactaaagaagaaggcaaggacgtcccg
gaccatgctgtgaatgagatgaaagctaactttgagctccctgagaagggtgtgctcttt
gatgaagtggaatatgttgagctgagtgaggaggagtgcaagcccctggtagagcgctac
cgcaaagaaggcaaggacgctggaggactcaaacctcgctttgaccgtcgtggtggtcga
gacttcagaggaggctatgaccgtggtggatacggccgtcatgatgaccgaagaggaggc
tatggcggcggtggtggctatcgctctggtggttatgatcatggtgaccgtcgtggaggt
tatggtggaggaggtggataccgaggaggctatcgtgaaggaggctggaaccgtggtggc
ggtggatatggtggtggtcgcggtggcggatatggcggtagtggtggctacggcggtgga
cgtggcggaggaggatacaacagtggtggatacggcagtggtagcagcagttacagtaat
cgtggaagcagcaactacggtagtggcagtagtaactacaacagaaactccagctctggt
gggtatggaaaccagagcagtggcggaagctatggcaatcgtcagaaccagggctcatac
aacaaatacggaaaccagtccaactaccaacagaacaggcagtcaaattacaatcagcag
tccagctacgggagtggtagtggatcaagtaactacagctcaaaccaaggctatggttct
tcatcaaactacggcaacacctcggggtatggaaataacagcaacaccagtagctacaac
cagggcagtcaaagctcgtacaaccaggggtatcaacagaaccaacagtctcagcagcag
acgcagcaacagtatgctaactatcaacagcagtaccaacaatactaccagcagaaccct
cagtatgcccaacagtacgcccagtactacagcaactatggcaactatggaggatctggg
tcaagccagtag
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