KEGG   Lytechinus variegatus (green sea urchin): 121418803
Entry
121418803         CDS       T11173                                 
Name
(RefSeq) signal recognition particle 54 kDa protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03060  Protein export
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    121418803
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lvg02044]
    121418803
Enzymes [BR:lvg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     121418803
Secretion system [BR:lvg02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   121418803
  Eukaryotic Sec-SRP protein
   121418803
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW nSTAND3 AAA SRPRB ResIII AAA_22 MobB nSTAND_NTPase5 Zeta_toxin AAA_17 AAA_33 NPHP3_N APS_kinase AAA_30 AAA_31 DUF2209 MeaB ATP_bind_1 MMR_HSR1 AAA_19 KTI12 PduV-EutP Thymidylate_kin 6PF2K AAA_18 AAA_16 NTPase_1 ArsA_ATPase UvrD-helicase
Other DBs
NCBI-GeneID: 121418803
NCBI-ProteinID: XP_041468882
LinkDB
Position
7:23730327..23750741
AA seq 508 aa
MVLADLGRKITSALKSLSNATIIDEDVLNSMLNEVCRALLEADVNIRLVKALKENVKSVI
DFDEMAAGLNKRKMIQTAVFKELVKLVDPGVKVWTPTKAKPNIIMFVGLQGSGKTTTCTK
LAYYYQKKGWKVALICADTFRAGAFDQLKQNATKARIPFYGSYTEVDPVIIAADGVEKFK
KENFEIIIVDTSGRHKQEDSLFEEMLQVSNVTNPDNIIFVMDASIGQACESQAKAFKEKV
DVASVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFKTKPFISKLLGMGDI
EGLIDKVSELNLDDNEELINKLKHGEFTLRDMYEQFQNIMKMGPFGQIMGMIPGFSSDFM
TKGNEQESMQRLKKLMTMMDSMNDEELDSREGAKVFMRCPGRVQRVARGAGVSVREVQEL
LQQYQKFAQMVKKMGGIKGLFKGGDMSKNVNPAQMAKINQSIARAMDPRVLQQLGGMNGL
QNMMRQFQQGAGNMGGMGGLGNMMGGGK
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggttttagccgatcttggaaggaaaatcacctcagctttaaaatcattgagtaatgca
actatcattgatgaagatgtacttaactctatgctcaatgaagtctgcagggcacttctt
gaggcagatgtcaatatcagacttgtcaaagctctcaaagaaaatgtcaaatctgtcatt
gattttgatgaaatggcagctggtctcaacaaacgtaagatgatccaaactgcagtcttc
aaggaacttgtaaagcttgtggatcctggagttaaggtatggactccaaccaaagccaaa
cctaacatcattatgtttgtgggactacaaggaagtggtaaaacaacaacttgcacaaag
cttgcctattactatcagaagaaaggatggaaagttgctcttatctgtgcagatacattc
cgagcaggtgcctttgatcaattaaaacagaatgcaacaaaagccaggataccattctat
ggcagctacacagaagttgatcctgtgattatagctgctgatggagtagagaagtttaag
aaggaaaactttgagatcatcattgttgatactagtggaagacacaagcaagaggattca
ctctttgaagaaatgttgcaggtctcaaatgttacgaatcctgataacatcatcttcgtc
atggatgcttctattggtcaagcctgtgagagtcaagccaaagcattcaaggagaaagtg
gacgttgcatcggtcatcatcacaaagttagatggacatgcaaaaggaggaggtgccctc
agtgctgttgctgcaacaaagagtcctgttatcttcataggaactggagaacatatagat
gattttgaaccttttaagaccaagcccttcatcagcaagctgttaggtatgggtgatatt
gaaggtttgatagacaaggtgagtgaactcaatctggatgacaatgaagaactcatcaac
aaactcaaacatggtgaattcacattacgggacatgtatgaacaattccagaatatcatg
aaaatgggaccttttggacaaataatgggtatgattcctgggttcagcagtgatttcatg
acaaagggcaatgagcaagaatcaatgcagagactcaagaaactcatgactatgatggat
agtatgaatgatgaagagcttgatagcagagaaggtgctaaagtgtttatgagatgtcca
ggcagagtacagagagtggccagaggagctggggtctcggtcagggaggtacaggaacta
cttcaacagtaccagaagtttgctcagatggtcaagaagatgggaggcatcaagggacta
ttcaaaggtggtgacatgtcaaagaatgtaaacccagctcagatggctaaaatcaatcaa
tcaatagcaagggctatggatcctagggtacttcaacaactaggtggtatgaatggtcta
cagaacatgatgaggcaattccagcaaggagcaggcaacatgggaggcatgggaggtcta
ggcaatatgatgggaggcggtaaatag

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