Lytechinus variegatus (green sea urchin): 121418883
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Entry
121418883 CDS
T11173
Name
(RefSeq) spectrin beta chain-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04517
IgSF CAM signaling
lvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121418883
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121418883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121418883
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121418883
Intermediate filaments
Intermediate filament-binding proteins
121418883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121418883
NCBI-ProteinID:
XP_041469007
LinkDB
All DBs
Position
7:26945645..27005846
Genome browser
AA seq
2354 aa
AA seq
DB search
MSVEMENNGVKWDNNEDVESSLDDGGAKLFERSRIRALADEREMVQKKTFTKWVNSHLQR
VGCRIVDLYTDLYDGRMLIKLLEVLSGDKLPKPTKGKMRIHCLENVDKALQFLKEKRVHL
ENMGSHDIVDSNHRLTLGLIWTIILRFQIQDISFEDEDNQETRSAKDALLLWCQMKTAGY
ANVDIRNFTTSWRDGLAFNALVHKHRPDLIDYNKLTKVQPVQNLNNVFNVAEQKLGLMKL
LDPEDVVVDHPDEKSIITYVVTYYHYFSKMKAETVSGKRIGKVISGAIDNDKLITEYDKV
TSDLLKWIRQTIEILNDREFANSLQGVQQQLLAFNTYRTVEKPPKFIEKGNLEVMLFTIQ
SKMRANNQKPFMPKEGKLVHDINKAWENLEKSEHGRELALRQELIRQEKLEQLAARFDRK
AAMRETWLSENQRLVAQDNFGFDLPAVEAAAKKHEAIETDIKAYQERVFAVVAVAQELEE
ERYHDIERINARKNNILRLWDYLIELLKARRARLQLSLDIQRRFQEMELLLDSMEETKVL
LLSEDYGKHLMGVEDLIQKHNMLESDIVVYGEQVTNINNQAAKYMDPNGPDGSGYLPVDP
EIVGSRMNHLEERYNELQELARLRRDKLDESLRLWQFFWDLADDENWIKEKQQIMSSTDI
GHDLTTVKLLLNKQKALETEISGRHAQLESNIRVGEDLIAEEHFGAPKIQDRITDVKNMW
QRLQELADQRKARLLEAVDLYQFFADADDVDTWMLDTLRLVSSEDVGRDEASAESLLKKH
RSIHGKTDDVTEELQNYANIIDGLHKQAAELGEQDRDSPEVQTRLGTIDRRYKELLELAK
LRKQRLLDALSLYKLFNEADAVEAWIDEKEHTLTALIPAEDLESNEVILARFDRLEKEVE
VNEAKVELVNQLARQLLAVEHPNSTEITTKQNQLNARWADLRALLEQKRDAVMAVTEVQT
YHIECQETTQWIKDKARLIQATEELGNDLGGIMVLQRRLKGMESDLAAIEAKLEALDNEA
QKLAEEHPEDAELIKKRYDEIMVVWLELKELLKSREAALAEAGDLHQFLRDLDDFQAWLS
RTMTTVASEETPESLAEAEKYLNKHAAIKDEIDGYEDKYAKMKENGQRITEGQTDTQYMF
LRQRLQALDDGWLELHQMWDNRQLLLSQALNYQMFQRDARQADSILNQQENFLTKVEQPN
SLEACDEAIKKYEHFIDQMATNDEKINTVLSFANRLCDEDHYAADKINKKAENIDERRKA
NRQAAEAMLEKLKDNRLLQSFLQEAEELGLWVVEKMVVAQEETYDGARSLHSKWQKHQAF
EAELVANKERLDKLKEHGDELIKEKPETQEEVQAKIADLEQQWNELENTTKDKGKTLFEA
NSQALFTQACDDMEQKIVDLETELCHADAAGDLVSVNNLLKKQQVYEQFLVIKQEEVESL
QCQVSSLENAEHIEKVTAKKEAMATRFSNLSDPLKKRREELEAQQKGYQVLRDLDDEKIW
VQEKLPLATSHDVGNNLQAVQTLQKKTNSLNAEVEGHVPQVEEVIERGKAMIEQGHPQSE
HIKVSITELEEHVIMLKSAITERKDKLVDSNKAQQYYFNAAEAEAWMSEQELYMMGEERA
KDEASAATMAKKHAILENAVEDYAETINELSHEAKQLIDEGHPQSDQIAIRQSQIDKLYA
GLKDLAEERRARLQETTRLFALNQEVDDIEQWIAEREVVAGSHELGQDLEHVTMLQQRFS
EFARDTHNIGTEKVAHTNRTCDTLINEGHADAATIAEWKDQINEAWADLLELIDTRTRML
AASYELHKFYSDAKDVLAHIQEKQQEMSEELGKDQQSVAILQRKHVSFQSDLSALGQQVK
DVQEEAGRLRAAYAGDKAREIDNREQEVVDAWNNLNSSIQFRSVRLDQTDELFRFLNLVR
ALMMWMEDILLQIINQDKARDVSGVELLMNGHQNIKAEIDTRDGNFTECFTMGKDMLARD
HYASKDIHAKLVQVGSKRQEMIAEWEHRWEYLQLILEVYQFARDAHAAEAWLISQEQYLR
SEDYGNSLDEVEKLIKRHEAFEKALYCQEERFTALEKLTTFELRELRKRQDEARRAAGED
SPPMKESPSLKHKIVDDFMNEEREKERRAKEEAEQEQQHQEQEELRQAATKYVEEVQEMV
SQEAEKEVHAGTAVDGAEGPDDDEPMAAEEEPAPGTVPAGALGGSNEAEGFLMRKYLFEP
SGKKASNRSWNHVYGVTHGQSLSFYKDPKNKLKEIPFNNEHPLNLAGATAEYAEDYTKKK
YVFRLKLADASEYLFQAKDSEELGYWLNQLHTAISGTGESASKEQRRAQTLPADSTSPGG
KKAKGKGLFTLKRK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagaaatggaaaacaatggtgtcaagtgggataacaatgaagacgtggaaagc
agcttggatgatggaggagccaagctgtttgagcgttctcgaatcagagcgctggcagat
gagcgtgaaatggtgcaaaagaaaacattcacaaaatgggtaaactcacatttacaaaga
gttggctgtcgcattgtggatctatatacggatttatatgatggacgtatgctaatcaaa
ctactagaagttttatcaggggacaaactgcccaaacctaccaaaggcaagatgcgcatt
cactgcttagagaacgtagacaaggccctgcaattcctgaaagagaaacgtgtacattta
gagaacatgggatcccatgacatcgtagatagcaaccacagattgaccctcggtctcatc
tggaccatcatccttagattccagattcaagatatttcttttgaagatgaagacaaccag
gagacgcgatcggctaaggatgccctcctcctctggtgccagatgaaaacagccggatac
gccaatgtagacatccgcaacttcacaacaagctggcgagatggtctggccttcaatgca
cttgtacacaagcataggccggacctgattgactacaacaaactgaccaaagtacaaccc
gttcagaacctaaacaatgtattcaatgttgcagaacagaaactaggcctgatgaagctc
ctagaccccgaagatgttgttgtggaccatcccgatgagaagtcaatcatcacctatgtg
gtcacctactaccactacttctctaagatgaaggccgagaccgtgtccggtaagcgtatc
ggcaaggtcatcagtggcgccattgacaatgacaagctgatcaccgagtacgacaaggta
acgtcagatctcctcaagtggatcaggcagaccatcgagatcctgaacgaccgggagttc
gccaactcgttgcaaggtgtacagcaacagcttcttgcattcaacacctacagaacagta
gagaaaccacccaaattcattgaaaagggcaaccttgaggtgatgttgttcaccattcag
agtaagatgagggctaacaaccagaaacccttcatgcccaaggaaggcaagctagtgcat
gacatcaacaaggcatgggagaacttggagaagtccgagcatggtcgtgagctggcgctg
cgccaggagctgatccgccaggagaagctggagcagctggccgcccgtttcgaccgaaag
gcggccatgcgtgaaacatggctgagtgagaaccaacgccttgtagcccaggataacttt
ggctttgacctgcctgccgttgaggctgcagccaagaagcatgaggctatcgagacagac
atcaaggcctaccaagagagggtgtttgccgttgttgctgttgcccaagaattggaagag
gagaggtatcatgacatcgagaggatcaatgcaaggaaaaacaatattctacgcctatgg
gattacctgatagagcttctgaaggcccgccgtgccagactccagctctcattggacatc
cagagacgattccaggagatggaacttctcctagactcaatggaagaaacaaaggtgctg
ctgttatcggaggactatggcaagcacttgatgggggttgaggatctcatacagaagcac
aacatgctggaatccgacattgtggtgtatggtgagcaagtcaccaacatcaacaaccag
gctgccaagtatatggaccccaatggaccggatggttcagggtacctaccggttgatcca
gagattgtcggaagtcgcatgaaccacctagaagaacgctacaatgagcttcaagaactt
gcccgtctcaggcgcgacaagctggatgagtccctgcgtctgtggcagttcttctgggat
cttgccgacgatgagaactggatcaaggagaagcagcagatcatgtcatcaacggatatt
ggacacgatctcaccactgtcaaactcctactcaacaaacaaaaggccttggagacggag
atatcgggtcgtcatgcacagctggagagcaacatccgggtgggcgaggacctgatcgca
gaggaacactttggagcaccaaagattcaggaccgtatcaccgatgtcaagaacatgtgg
cagaggctacaggagctggctgaccagaggaaagctcgtctcctcgaagctgttgacctc
taccagttctttgctgatgctgatgacgttgacacctggatgttggatacccttcgtctt
gtttcaagcgaagacgttggaagagacgaagccagtgccgaatctcttcttaagaaacac
aggagtattcatggcaagacagatgatgttacagaagaattgcagaactacgccaacatt
atcgatggtctgcacaaacaagcagcagagctgggagaacaggaccgagactctccagaa
gtacagacccgtcttggaaccatcgacagacgatacaaggagctcctggagcttgccaag
ctccgcaagcaacgcctcctcgatgccctctccctctacaaactcttcaacgaggctgat
gctgtcgaggcatggatagatgagaaggagcatacattaactgctcttatcccagctgag
gatctagaatccaatgaggtcattctggctcgctttgaccgtctggagaaggaggtagag
gtcaacgaagccaaggtagaactggtcaaccaactggccagacagctactggccgtagag
catccaaactcaacagaaatcacaacaaaacagaaccagctcaatgccagatgggccgat
ctacgtgccctcttggagcagaagcgggatgctgtcatggctgtcaccgaggtacagacc
taccacatcgagtgccaggagaccacccaatggatcaaggacaaggctcgtctcatccag
gccacagaagaacttgggaacgaccttggaggcatcatggtcctacagcgcagactcaaa
ggcatggagagcgacctggctgctatcgaggctaagcttgaagcccttgataacgaggct
cagaaacttgctgaggaacacccagaggatgctgaacttatcaagaagagatatgatgag
atcatggtagtctggcttgaactcaaggaactgctgaaatctcgtgaagctgctctggcc
gaggccggtgacctccatcaattcctgcgtgacctggatgacttccaggcctggctatcc
aggaccatgaccaccgtggcatcggaagagaccccagagtctctggccgaggctgagaag
tacctcaacaaacatgctgccatcaaggatgaaatcgatggttatgaagacaagtatgcc
aagatgaaggagaatggacaacgcatcacagaaggacagacagacacacagtacatgttc
ctcagacagcgtctgcaagcgttggatgatggatggcttgagcttcaccagatgtgggac
aaccgtcaactcctcctttcccaggctctcaactaccagatgttccagcgtgatgcacgt
caagctgacagcattctcaaccaacaggagaacttccttaccaaagtggaacaacctaac
tcccttgaggcctgtgatgaagccatcaagaagtatgagcatttcattgaccagatggcc
accaacgatgagaagatcaacactgtattatccttcgctaacaggctgtgtgatgaagac
cattatgctgcagataagatcaacaagaaggcagaaaacattgatgaaagacgaaaggcc
aaccgtcaagctgccgaggctatgcttgagaagctgaaagacaaccgtctcctgcagtcc
ttcctccaggaggctgaggagctcggtctctgggtggtggagaagatggtcgtagcccag
gaggaaacctatgatggagccaggagtcttcatagcaaatggcagaaacaccaggccttc
gaagctgagcttgtcgccaacaaggagcgccttgataagctcaaagagcatggagatgaa
ctcattaaagagaagcccgagacccaggaggaagtccaggccaagattgctgaccttgaa
cagcaatggaatgagcttgagaacactaccaaagacaagggtaagaccctgtttgaagcc
aacagccaggctctcttcacccaagcttgtgatgacatggaacagaagattgtggaccta
gagaccgagctttgtcatgctgatgctgctggggatcttgtctcggtcaacaacctgctc
aagaaacaacaggtctatgaacagttcctggtaatcaagcaagaggaggtagagagttta
caatgccaggtatcctcactagagaatgctgaacacatagagaaggtgacggccaagaag
gaagccatggccactcgattcagcaacctatcagatccactcaagaagaggcgagaagag
ctggaggcacaacagaaaggctaccaggttctcagggatcttgatgacgagaagatctgg
gtccaggagaagctgcccctggctacttcccacgatgttgggaacaacctccaggcagta
cagaccttgcagaagaagaccaattccctcaatgccgaggtggagggccacgtgcctcag
gttgaggaggtgatcgagaggggtaaggccatgattgaacagggtcatcctcaatcagaa
cacatcaaggtcagcatcacagagcttgaggaacatgtcatcatgctcaagtcagccatt
acggaaaggaaagataagctggttgactcaaataaggcacaacagtactacttcaatgca
gcggaggctgaagcctggatgagtgaacaggagctgtacatgatgggtgaagaacgtgct
aaggatgaagccagtgctgctaccatggctaagaagcatgccatccttgagaatgctgta
gaagactatgcggagaccatcaatgagctctcgcatgaggctaaacaactcatcgatgaa
ggacatccacagagtgaccagattgcaatccgtcaatctcagattgacaaactttatgcc
ggtctgaaggatcttgccgaggagaggagagcacgcctccaagagactaccagactcttt
gccctcaaccaagaagttgatgacattgagcaatggatcgctgagagggaagttgttgct
ggttcacatgaacttggacaggaccttgaacatgttacgatgttgcagcaacgattttca
gagtttgcccgtgacacccacaacattggcacagagaaggttgcccacaccaacaggacc
tgcgataccctcatcaacgagggtcatgccgatgctgcaaccattgccgaatggaaagac
caaatcaatgaagcttgggctgatctccttgaactcattgacacaaggacaagaatgttg
gctgcatcatatgagcttcacaagttctactctgatgccaaggatgtccttgcacatatc
caggagaagcaacaggagatgtcagaggaattgggcaaggatcagcaatcagtagccatc
ttacagaggaaacacgtctccttccagagtgatctctctgctcttggccaacaggtgaaa
gatgtccaagaggaggctggccgtcttcgagctgcctatgccggtgacaaggctagggag
atcgacaacagagagcaggaggtggtagatgcttggaacaacctcaactcatctatccag
ttccgatcagtcaggctagaccagactgatgagctcttcagattcctcaaccttgtcagg
gcactcatgatgtggatggaagacattctgctccagatcatcaaccaggacaaagctagg
gatgtatccggtgttgagcttttgatgaacggccatcagaacatcaaagcagagattgac
actagggatggcaacttcacagaatgtttcaccatgggtaaagacatgttggcaagagat
cactacgcatctaaggatatccatgccaagctagtccaggttggtagcaaacgtcaagaa
atgatcgctgaatgggaacacagatgggaatacctacagctcattcttgaggtataccaa
tttgcccgtgatgcccatgctgctgaagcctggctgatcagccaagaacagtacctgaga
agtgaagactatggaaactcactagacgaggttgagaaattgatcaagaggcacgaggcc
ttcgagaaggccctctactgtcaagaagagagattcacagcactcgagaaactaacaaca
tttgagctgagagaactacgcaaacgtcaagacgaggcccgccgtgccgctggtgaggat
tctccacctatgaaggaatcaccgtctctcaaacacaagattgtggatgacttcatgaat
gaggaaagagagaaggaacgaagggcaaaggaagaagctgagcaggaacaacaacaccaa
gaacaggaagagcttaggcaagctgccaccaagtacgtagaagaagtacaagagatggtg
agccaggaagccgagaaggaggtccatgccggtacagctgtagacggtgcagaaggccca
gatgatgatgaaccgatggctgctgaagaagaaccagcaccaggaactgtaccagcagga
gccttgggtggaagtaatgaagctgaaggtttcctcatgaggaagtacctatttgagcca
agcggcaagaaggcttctaacagatcttggaaccatgtatacggagtgactcatggccaa
tcactctcgttctacaaggatcctaagaacaagctcaaggaaatcccattcaataatgaa
catcctctcaatctggctggggctactgcggaatacgcagaagactacaccaagaagaaa
tatgtcttcaggctcaagttggctgatgcatctgaatatctattccaagcaaaggacagt
gaagaactgggctattggctgaaccagcttcatacagctatctctggtactggggaatct
gcatccaaggaacagagaagagcccaaactctcccagcggactccacctcaccagggggc
aagaaggccaagggaaagggcctctttaccctcaagcggaagtga
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integrated database retrieval system
