Lytechinus variegatus (green sea urchin): 121418999
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Entry
121418999 CDS
T11173
Name
(RefSeq) thyroid transcription factor 1-like isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121418999
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121418999
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Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
121418999
NCBI-ProteinID:
XP_041469191
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Position
7:complement(31108284..31115830)
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AA seq
409 aa
AA seq
DB search
MSYSPKQTTSFSVTDILTPLEESFRRSMLDSPGSAFPSVFSASPSMQSAYRSPQHSAHQG
MQVSPMNMASANNPYAHMHVPQLSHNYCNGSVGELTPHYSDHRPSAASWYHGASPDPRFT
ISRLMNHSSTMNMNMNMNMNMNMNMNMSTLSAVGSGDLGKPLLPSHRRKRRVLFSQAQVY
ELERRFKQQKYLSAPEREHLANLINLTPTQVKIWFQNHRYKMKRQAKEKNMQDSNTICHQ
SPRRVAVPVLVKDGKPCNGSGGGGGAGGDLTDDDERSLSEQVEGVNDQGVVGGPQQPQPQ
QHQQANATQSMTSQQAAANHHVSMKASPVEPSSCGIPISIPSSDSGIGLSPVSVHAHHQH
PQSQASLHHQASAMHSLYSPSAGATGMTHNGAVNNMSATAPFLLHGRTW
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatagccccaaacagaccacttcgttctctgtcaccgatatcttaacacccctt
gaagagagtttcagacggtctatgttagatagtccaggatccgcctttccatcggtcttc
tcagcctcaccgagcatgcaatcggcttaccgttcccctcaacattcggctcatcaaggc
atgcaagtctcgccgatgaacatggcttcggccaacaacccatacgcccacatgcacgtc
cctcagctgtctcataactattgcaacggatcggtcggggaacttaccccgcactacagc
gatcatcgtccgtcagcggcgagctggtaccacggcgccagccccgacccacgttttaca
atttcccgtttgatgaaccactcatccacaatgaacatgaatatgaatatgaacatgaat
atgaacatgaatatgaacatgtccacactatccgcagttggcagtggggatctgggcaag
ccgctactaccgtcccatcgccgaaagcgccgggtgctgttctcccaagcccaggtgtac
gagttggagaggcgtttcaagcaacagaagtacctatcagcgccggagagggaacacctt
gctaatctcatcaacctgactccaacccaagtcaagatctggttccagaatcaccgctac
aagatgaagaggcaggccaaagagaagaacatgcaggatagcaacaccatttgtcatcaa
tctcctcgaagggtggcggttccagtgctcgtcaaagacggtaagccttgtaatggaagc
ggtggaggagggggtgcagggggagatttaaccgatgatgatgagcgcagtctcagtgaa
caggtggagggggttaacgaccagggcgtggtcggtggtccccaacaaccgcagccgcag
cagcaccagcaagccaacgccacgcaatccatgacatcgcagcaagccgctgcaaaccac
cacgttagcatgaaagcgagtcccgtggagccgagctcgtgcgggatacccatcagcatc
ccatccagcgattcaggcatcgggctcagtcctgtttccgtccatgcgcatcatcaacac
cctcaaagccaagcttcgttgcatcatcaggcaagtgccatgcacagtctttatagcccc
agtgcaggggccactggtatgacccataatggtgctgtcaataacatgtcggcaacggcc
ccttttctccttcacggtagaacgtggtaa
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integrated database retrieval system
