Lytechinus variegatus (green sea urchin): 121419000
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Entry
121419000 CDS
T11173
Name
(RefSeq) homeobox protein Nkx-2.2a-like isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121419000
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121419000
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
New_glue
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
121419000
NCBI-ProteinID:
XP_041469193
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Position
7:complement(31186062..31192296)
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AA seq
438 aa
AA seq
DB search
MSVISPQTKPDSGYFFSSPGFPTSRHAYMNSQALDFGSVGQLQSANKHAKLFSADLLNSA
ILEDSDAAMNAAKTSFSVKDILDLPHAAVAAAAAAGVTGATHPITGLPLDKAFLTDSQME
ALKQTMTNGTDQGTGGGGGGGRVDTGVVSGQTGVDSIYDQSDNPYTRWLQNQGGDAVHYP
SLTQNTVSHNSTSSTATSPTSTTASAQVHEDDDDDIDSIASDKDGDSASRDTSSPSSGDP
PKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASIIRLTPTQVKIWFQNHRYKLKR
ARQEKGLDLNPLPSPRRVAVPVLVRDGKPCNAGMGGMNGTNMGTHGAAAAAAAAAASACM
SAAAKSHHHHHHHHQDSLLAPTAAVTAPPPLQHMQHYPSPCSYSTVTAPYNSNYSSFSNM
SMANNMQYTGSMAQPWAW
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgatatcacctcaaactaagccagattctggttatttcttttcttctcccggt
tttcctaccagccgacacgcctatatgaatagccaagctctagacttcggctctgtcggt
cagctccagagcgccaacaagcatgctaaactcttctcagcggacctcctcaactccgcc
atcctagaagactcggatgctgcgatgaatgccgccaaaacgagcttttcagtcaaagat
atcttggacctaccacacgccgccgtggctgccgccgctgctgcgggggtgaccggagcg
actcacccgatcaccggactgccgctggataaggcattccttacagactcgcagatggaa
gcattaaaacagacgatgactaacgggacagaccagggaacaggtggcggtggtggagga
ggacgagtggatacaggagtggtctctggacagacgggtgtggattcgatctacgatcag
agtgataacccgtataccagatggcttcaaaatcaaggaggcgatgcagtccattatcca
tcgttgacacagaacacagtatcccacaacagcacctcatccaccgcgacatcacctact
tccacgacggcatccgctcaggttcacgaagatgacgacgacgacatcgactccattgct
tccgataaggacggtgactcggcgagtcgtgacacgtcatcgccgtcatcgggtgatcct
ccgaagaaacgaaagcgacgtgtgctgttctccaaagcccagacatacgaactagagagg
agatttcgacagcagagatacctatccgcaccagaaagggaacacttggcgagtatcatc
cgactcacgccaacacaagtcaagatttggttccagaaccaccgctacaagctgaagcgt
gcccgccaagaaaagggcctagacttgaatccattaccgtctcctcgacgcgttgccgtt
cccgttctggtgagagatggcaaaccttgcaacgctggtatgggtggtatgaatggtacc
aacatgggaacacatggagctgcagcagcagcggcggcagcggcagcatcggcctgcatg
tcagcagcagccaagtctcaccatcatcaccatcaccaccaccaagactcgttgttggcg
cccacggcagccgtgacggccccaccacctctacaacacatgcaacattatccgtcacct
tgtagctattcaacagtgacagcaccgtataacagtaactatagttcatttagcaacatg
tcaatggcaaacaacatgcagtacacaggttcaatggcacaaccttgggcgtggtga
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