Lytechinus variegatus (green sea urchin): 121419214
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Entry
121419214 CDS
T11173
Name
(RefSeq) serine--tRNA ligase, mitochondrial-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121419214
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lvg01007
]
121419214
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121419214
Enzymes [BR:
lvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
121419214
Amino acid related enzymes [BR:
lvg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121419214
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121419214
Prokaryotic type
121419214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
CapK_C
HAUS2
Motif
Other DBs
NCBI-GeneID:
121419214
NCBI-ProteinID:
XP_041469506
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All DBs
Position
7:complement(38098978..38139534)
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AA seq
509 aa
AA seq
DB search
MATISGYPKQLVRRLWHIHRQIKISTVSQSDCVRWMNTHRVGSPYQRLCSLCYRSFDQSR
NLATISKDDGMGDWMFSSDFKPAIDLDYLAKNAEVIADRISHRKGNIEVQEVLRRMKEFQ
HIQEHVHDVQIRLQADKERGLNTQELEHTLKEKEMQLHRAENNFYQIAVAIPNSTHPNVP
MNEDAEPVLIEEINEKRSFDFPIKGHVELGEELDIIRLKNLGHTTGHRSYFLKGAGAMLE
DALVRFTLDRLIKKHGFKIIKVPDIIKPVVFEGCGMRTEGLHTQVYRLSSDHHDTDMCLA
GTAEVGIAGYLMNRTIPMSELPMKLAAMSRCYRAETAHSADARGLYRVHQFTKVEMFCVA
ANERENESEEIFHEFVGIQRDLFRDLGLHFQILDMPAHDLGAPAYRKFDMEAWMPHRKAY
GEVSSTSNCTDFQSRRLHIQYKPSPESPAKYVHTLNGTACAVPRLIIAILENNQQRDGSI
VIPEPLQPYMDGMREITRPASGKLHFTRL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccactatctcaggctacccaaagcaactcgtcagaagactatggcacatccacaga
caaatcaagatctcaacagtttcccaatctgactgtgttagatggatgaatacacatcga
gttgggtcaccatatcagaggttatgtagtctatgttatagatcatttgaccaatccaga
aatctagcaactatctctaaggatgatgggatgggcgactggatgttctcttcagatttt
aagccggctattgatctggattatcttgctaaaaatgctgaagtaatcgcagaccgtatc
agccacagaaaaggaaacattgaagttcaagaagttctacggaggatgaaagaatttcag
catatccaagagcatgtccatgatgtacaaattagacttcaagctgataaagagagagga
ctgaatacacaggaattggagcacacattgaaggagaaagaaatgcagcttcatagagca
gaaaataacttctatcagattgcagtagccattccaaattcaacccatcctaatgtgcct
atgaatgaagatgcagaacctgtgttgatagaagaaataaatgagaagagatcatttgat
tttcccatcaaaggacatgtggaactaggtgaagagctagacatcattagattaaagaat
cttggacataccacaggccaccgatcatactttttaaaaggagctggagcaatgctagaa
gatgctcttgttagattcactttggatagattaatcaagaaacatggctttaagatcatc
aaagtacctgatattatcaaaccagttgtatttgaaggatgtggaatgaggactgaaggt
cttcatactcaggtttatcgtctatcatctgaccaccatgatactgatatgtgtttagct
gggacggctgaagttggcattgcaggatatttaatgaacaggacgataccaatgtctgag
cttcctatgaagctagctgctatgagtcgatgctatcgagctgagacagctcacagtgct
gatgctagaggactctatagagtacaccagtttactaaggtggagatgttttgtgtagca
gctaatgagagagaaaatgaaagtgaggaaatctttcatgaatttgtaggaatccaacgg
gacctgttcagagatttaggattgcatttccagatattagatatgcctgcccatgactta
ggagctcctgcatataggaaatttgacatggaagcctggatgcctcacaggaaagcttat
ggagaggtttccagtacttcaaactgcacagactttcagagcagacgacttcacatccaa
tataaaccaagcccagaaagtccagctaaatatgttcacacattgaatggtacagcttgt
gcagtgcctcgcctgatcattgccatcttggagaacaaccaacagagggatggaagtatt
gtaatccctgaaccacttcaaccatacatggatgggatgagagagattacaagacctgca
tcagggaagctacattttacaagattatga
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