Lytechinus variegatus (green sea urchin): 121419222
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Entry
121419222 CDS
T11173
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03015
mRNA surveillance pathway
lvg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121419222
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121419222
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lvg01009
]
121419222
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121419222
03036 Chromosome and associated proteins [BR:
lvg03036
]
121419222
Protein phosphatases and associated proteins [BR:
lvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121419222
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121419222
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121419222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
Polysacc_synt_3
Motif
Other DBs
NCBI-GeneID:
121419222
NCBI-ProteinID:
XP_041469514
LinkDB
All DBs
Position
7:38394519..38474294
Genome browser
AA seq
461 aa
AA seq
DB search
MSSGSTAVDKIDPFAKKSLRKGKQKKSQGSSQYRLSNNTDIQQLSLLKDTPPPEQQELVV
KKLEQCCMVFDFMDAVSELRGKEIKRASLNELVDYITSGRGVLTEPLYPEFIQMISCNIF
RTLPPSENSDFDPEEDEPTLEASWPHLQIVYEFFLRFLESPEFQPSIAKKYIDQKFVMHL
LELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINHIFLRFIYETEHFNGVGELLEI
LGSIINGFALPLKAEHKQFLIKVLIPLHKVKCLGLYHAQLAYCVVQFLEKDSALTEQVVT
GLLKYWPKTCSAKEVMFLGEIEEILDVIEPVQFAKIQEILFKQLAKCVVSPHFQVAERAL
YFWNNEYVVSLIEENSNVVMPIMFPSLYRISKEHWNQTIVALVYNVLRTLMEMNSKLFDE
LTSSYKTDRQKEKKKEKERDELWKRLSKLEMNYLNNQTNSS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgggtcaacagcagtggacaagatagatccctttgccaagaaatccttacgc
aagggaaagcaaaagaagtcacaaggttcttcacaatatcgactgagtaacaacacagat
attcagcaacttagtttgctgaaagacacaccccctccagaacagcaagaattggttgtc
aagaagctagaacagtgctgcatggtgtttgactttatggatgctgtatctgagctcaga
ggcaaagaaatcaaaagagcaagtctcaatgagctagttgattacatcactagtgggagg
ggagtcctcacagaacccctatatccagagttcattcaaatgatctcatgtaatatcttc
agaacattgccgcccagtgaaaactcagattttgatccagaagaagatgaaccaacacta
gaagcatcatggccccatttacagattgtatacgaattcttcctgagatttttagagtca
ccagaattccaacccagcatagccaagaagtacatcgatcagaaatttgtgatgcatctg
ctggaactttttgacagtgaagatccaagggagagagacttcctcaaaacagtgttgcat
cgaatctatggcaagtttctaggcctcagggcgttcatcagaaaacagatcaaccacata
ttcctcagatttatatatgaaacagagcactttaatggagttggggaattattagaaatt
ctgggaagcattatcaacgggtttgcattaccactgaaggcagaacacaagcaattcctt
atcaaggttctcatcccattacataaagtaaaatgtttgggtctataccatgcacagttg
gcatactgtgtggtgcaattcctggagaaagattcagctcttacagaacaggttgtaact
ggattactaaaatattggccaaagacatgtagtgcaaaagaggtaatgtttcttggtgaa
attgaggagattctagatgtgatagaaccagtccagtttgccaagatccaagaaatcctt
ttcaagcagcttgcaaagtgtgttgtcagtccacatttccaggttgcagaacgtgccctg
tacttctggaataatgagtatgtagtgagcttgatagaagagaacagcaatgttgtcatg
ccgataatgttcccaagtctctacaggatatccaaagaacactggaatcaaacaattgtt
gccttggtctacaatgtactcaggacactgatggagatgaatagcaaactatttgatgaa
ctcacttccagctataagacagataggcaaaaagagaagaagaaggagaaagaaagagat
gaactgtggaaacgcttgagtaaacttgaaatgaactatctaaataaccaaaccaatagc
agttag
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