Lytechinus variegatus (green sea urchin): 121419276
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Entry
121419276 CDS
T11173
Name
(RefSeq) nephrocystin-1-like
KO
K19657
nephrocystin-1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121419276
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121419276
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
121419276
NCBI-ProteinID:
XP_041469599
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All DBs
Position
7:complement(39925334..39957405)
Genome browser
AA seq
1086 aa
AA seq
DB search
MMPKEKSPLRTLQREGDTLKKEIDAYMEECALVLDDSTLKDRTSRMKKLFERCGTLRKKC
KALEKKLSNLSKGKEPIVIPNFDEARCDEADRMHALEVRLGKIGSKLEPDEVEESYFNNM
KGKDKASERQGNKPSTGWADNDSDDDDDDDDDDSDEEDEENEGEGEEESKMETTNPEEEN
DEDDEKEDDAKKTKLKRLSVFRRSKTDKGDDDVEKDKKDKDKKDKDKKDKDKKDKKEKDK
KGKEKSEKEKEKEKEKERKEQEKKEKKEKEKLEKERKEKEKKEQKEKEQEEKRKKKEKEI
AAKSAKSKKGEDGDAKKEKDEDKRPDSPTKRGFGAKLFSRDSKKPKTDTSKQEIVEDGSD
DDGDGEDDEDVDGMDSEEGERSEEDMEEEEEEDEEEEEEEGPEDLEEEGEEEEEDEQVKQ
KKVEAKQDKKKGWSLFRKDKSPQRQIKKENEKDNKKKKIEDKKQVRVQEEEEEEEYEDEG
EEEEDEYEDEEEEEEEEEEESEEEQVVVKGKKPQKVESEEEEEDSEEGEEEEEEEEELDD
DDEEEEEELFDEESEEESFKPPDEGMDLFEAVCDFDGEEDDDLNFKRGAILTILNVREDG
WWMAEDEEGNKGLVPSTYLKLKKEHNDYRDVQSPEVDESGQQDELNESGKELWRGLRKSV
TETGVTDVLAAMGAIPAGFRPSTTARHLKSDAYTLCNFLKPRFTESCLGFQDLNWSPHEN
QIRAKTVRLQKILTILMVRNMPACGVGIEIRSRHVRICFFNGDKILSNIHTIQATWNKND
PKTWRFSPKVTSLLPSILDGDCFIRSSHTEENIGLLFELCLSYVRPKTGEKGELSCGWVN
VPLYDTSTGAPIVNKMYDLQVQGGTPYEQEVEVDPSISRRKDSTSSTGSSSKFRSMMSAN
KQPRLQIKFITPTKEQKPLLDMLPETIVSSLSYLPFLSIFRNLQAVEVLRDRIDLQNADL
IHDPVLANFPEATKYPDIMDALRSCWADKKLKNKKIDKKNPEQMKELFMTTFMDSVYPIM
RLPSLPPYKWADEDRDIERWQVISEFLQSNKQKGILASFLAPGGEHTPFDMTEVAFNLFD
SFQELK
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgaaagagaaaagtcctcttcggaccctgcagagggaaggagatacattgaaa
aaggagattgatgcatacatggaagaatgtgcattagttttggatgattcaactcttaag
gacagaacttcacgaatgaagaaactatttgaacgatgtggaactttgaggaaaaaatgc
aaagcacttgaaaaaaagctttcaaatttatccaagggtaaagagccaatagttataccc
aactttgatgaggctagatgtgatgaggcagaccgtatgcatgcccttgaggtgaggttg
gggaaaataggcagtaaactggagcctgatgaagtggaggaatcttatttcaacaatatg
aaaggtaaagacaaagcaagtgaaagacagggaaacaagccatcaactggatgggctgac
aatgatagcgatgatgatgacgatgatgatgatgatgacagtgacgaagaagatgaggaa
aatgaaggtgaaggagaagaagaaagcaagatggaaactaccaatccagaggaggaaaat
gatgaagatgatgaaaaggaagatgatgcaaagaagacaaagttaaaacgattaagtgta
tttcgacgttccaagactgataaaggtgacgatgatgtagagaaagacaagaaagacaaa
gacaaaaaggacaaagacaaaaaagataaagataaaaaagacaagaaagaaaaagataaa
aagggaaaagaaaagtcagagaaggaaaaagaaaaggaaaaagaaaaagaacgtaaagaa
caagaaaagaaggagaaaaaagaaaaggagaaattagaaaaggaaagaaaagaaaaggaa
aagaaagagcagaaggaaaaagaacaggaagaaaaaagaaagaagaaagaaaaggaaata
gctgcaaaatcagcaaaaagtaagaagggggaagatggtgatgctaaaaaggaaaaagat
gaggataaacgacctgactcacctactaaaagaggctttggagctaaattattcagtcga
gactcaaagaaacccaaaacagatacatctaagcaagaaattgttgaagatggaagtgat
gatgatggcgatggtgaagatgatgaagatgtggatggaatggatagtgaagaaggagaa
agatcagaagaggacatggaggaggaggaagaagaagatgaagaagaggaggaagaagag
ggacctgaagatcttgaggaggaaggagaggaagaggaggaggatgaacaagtcaaacaa
aagaaagttgaggctaaacaggacaagaagaaaggatggagcttattccgcaaagacaag
tcacctcaaaggcaaatcaagaaggagaatgaaaaggataataagaaaaagaagatagaa
gacaaaaagcaagtaagagtacaggaagaagaagaagaggaggaatatgaagatgagggt
gaagaagaagaagatgagtatgaagatgaggaagaggaggaggaggaggaagaggaggaa
tcagaagaggaacaagtggtggtgaagggcaagaaacctcaaaaagttgaaagtgaagag
gaagaagaagatagtgaagaaggtgaagaagaggaagaggaggaagaagaactagatgat
gatgatgaagaagaggaagaagaattatttgatgaagaatctgaagaggagagtttcaaa
cctcctgatgaagggatggatttatttgaagctgtttgtgattttgatggtgaagaggat
gatgatcttaactttaagagaggtgctattcttactatcctcaatgtaagggaggatggt
tggtggatggctgaagatgaagagggtaataaaggtctggtaccaagtacatacctcaag
ctaaagaaagagcacaatgactacagagatgtgcaatcacctgaggttgatgagagtgga
cagcaggatgaattgaatgagagtggtaaagagctatggagaggtcttagaaagtcagtt
actgagactggagttactgatgtattagcagcaatgggtgctataccagctggattcaga
ccttctactactgctagacatctcaagtcagatgcctacactctgtgcaacttcttaaag
cctcgcttcacagagtcttgtctagggttccaggacctgaactggtctccccatgagaac
cagatacgagctaagacagtccgtcttcagaagatcttgaccatcctcatggtccgtaat
atgcctgcttgtggtgtaggaattgaaatccgaagtcggcatgtcagaatctgtttcttt
aatggggacaagattctcagtaacatccacaccatacaagccacatggaacaaaaatgat
cctaagacatggaggttctcaccaaaggttacatccctactacctagtatattagatgga
gattgttttatacggtcatctcatacagaagaaaatataggtcttctatttgaactgtgt
ctttcgtacgtgagaccgaaaactggagagaaaggagaattaagctgtggatgggtcaat
gtaccactctatgatacatcaactggagcaccaatagttaataaaatgtatgaccttcaa
gtgcaaggtgggacgccctatgaacaggaagtagaagttgacccctccatcagtaggaga
aaagattcaacaagttcaacaggcagctcaagtaaattccgttcaatgatgtctgcaaac
aagcaaccaagacttcagattaaattcatcacaccaaccaaagaacagaaacctctgtta
gacatgttaccagaaacgattgtcagctctctcagctaccttccattcctcagtatattc
cgtaatcttcaagctgtagaggtcctacgggataggatagatctccagaatgcagatctg
attcatgacccagtgctggcaaattttcctgaagccacaaaatatcctgacatcatggat
gcattaaggagttgctgggcagacaagaaacttaagaacaagaagattgacaagaagaat
ccagagcagatgaaggagctattcatgacaaccttcatggattcagtgtatcctattatg
agattaccatcattacctccttacaagtgggctgatgaagacagagacattgagagatgg
caggtgatctcagagtttcttcagtcaaacaaacagaaagggatccttgcctccttcttg
gctcctggtggagaacacactccttttgacatgacagaggtggccttcaatctgtttgac
tcctttcaagaactcaagtga
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