Lytechinus variegatus (green sea urchin): 121419416
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Entry
121419416 CDS
T11173
Name
(RefSeq) Bardet-Biedl syndrome 1 protein-like
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121419416
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
BBSome
121419416
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GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
TcfC
Beta-prop_BBS7
Beta-prop_IFT122_2nd
Beta-prop_LRRK2
PHTB1_N
TcdB_toxin_midN
Motif
Other DBs
NCBI-GeneID:
121419416
NCBI-ProteinID:
XP_041469808
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All DBs
Position
7:44377549..44403256
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AA seq
599 aa
AA seq
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MSVESDKNELSNVDKSSIMSHEGNTKWLDAHNDPVASLYTFSSCMAFSDISGDGEAKLVI
ADLGTGTFDMKLKVYKGTTLISENAIIDLPTGVCTFYMDNNEPRVPAIGVASGPYLYVYK
NLRPYFKFTLPPLDVNPVEQDLWNQAREDKIDVTVLREMLDSIRREGNEGALTVRSLKFL
MLQDREQMESFANLHKVGQLKRQTVITCLDTLHKSTSDDDAISCLVVGTESREIYVLDPE
AFTILTKMAVPSVPVFLSVSGLYDVEFRIIMSCRNGNVYTLKRGMKMAKLCFELNSQPVG
LQRVGKNIIVGCMDQTLQCYTTKGKKLWTVYLPAAITTMDLMDHRQKGFKAVMVALRNGE
VHIYRDKFLINSIKTEDIITGLKFGRFGREDSTLVMSTKRGGLIVKILKRNAAFEDKDMV
RGPPASQQQKLNVPKKTKVFVDQTMREREHGVSMHRMFQHDLYRLRLTTARAFVKALDSS
LTPVSNNLNEPIKLSAHVHGIGPTFKLTVSLQNTSLSKPSLGLLISFLYDEKLYSLQKTM
IPVPILVPGLNYTYETLVECMSDKGIADVIKVFVVKEGRSTPIITAVINMPVSETMVVV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagaaagtgacaagaatgaactctccaacgttgacaagtcaagtattatgagc
catgaaggaaatacaaagtggcttgatgctcacaatgaccccgttgcaagcctatatacc
ttctcatcatgtatggccttttcggacatatctggcgacggagaagcaaagctcgtcatc
gctgaccttggaacaggaacttttgacatgaagcttaaggtttacaaaggaactaccctg
ataagtgagaatgctatcattgatctaccaacaggtgtctgtacgttctacatggataac
aatgaacctagagtaccagctattggtgtagcatcaggtccatacttgtacgtctacaag
aatctgaggccttatttcaagtttactctccctcctcttgatgtcaacccagttgaacaa
gacttatggaatcaggctagggaagataaaattgatgtcactgtcctgagggagatgcta
gatagcataagacgagaaggaaatgagggagccctaaccgttagatctctcaagttttta
atgttacaagacagggaacagatggaatcctttgctaatttacataaagtaggccagctt
aaaagacagactgtgataacctgtcttgatacattgcataagagcacatctgatgatgat
gctatcagctgcttagtagttggaacagagagtagagagatctatgtcttagacccggag
gctttcaccattcttacaaagatggctgttccaagtgttccagtatttctgagtgtatca
gggctgtatgatgtagagtttagaatcatcatgtcttgtaggaatggaaatgtttataca
ctcaagagggggatgaagatggccaaactttgctttgagttgaattcacaacccgtaggt
ctacagagggttggtaaaaacatcattgttggctgcatggatcagacattacagtgttac
acaacaaagggtaagaagctatggacagtatacctccctgctgctattactacaatggat
ctaatggatcatagacagaagggatttaaagcagtcatggttgctctcaggaatggtgaa
gttcacatctacagggataagttcctcattaactctatcaaaacagaggacatcatcact
ggtctaaagtttggtaggtttggtcgtgaggatagcacccttgtaatgagtaccaagcga
gggggtctcattgtcaagatccttaagagaaatgcagcctttgaagataaagacatggtt
agaggacctccggcttcacagcaacagaagcttaatgttcccaagaaaacaaaggtcttt
gtagatcagactatgagagagagggaacatggtgtctctatgcatcggatgttccagcat
gacttgtataggttacggctcactacagctagagcgtttgtgaaggccctagattcaagc
ctcacaccggtctctaataacctcaatgaacccatcaagctctcagctcatgtccatggt
ataggaccaacattcaagttgactgtgagtttacagaacacatccttgagcaaaccatct
ttaggtctactcatcagtttcctgtatgatgagaaactgtactctctacagaagaccatg
atcccagtacctatccttgttcctggtctgaactacacctatgagacactggtagaatgc
atgagtgataaaggaatagctgatgttataaaggtatttgttgttaaagaaggcagaagt
acacctatcatcacagcagtaatcaacatgccagtcagtgagaccatggttgtcgtatga
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