Lytechinus variegatus (green sea urchin): 121420030
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Entry
121420030 CDS
T11173
Name
(RefSeq) double-strand break repair protein MRE11-like
KO
K10865
double-strand break repair protein MRE11
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03440
Homologous recombination
lvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121420030
03450 Non-homologous end-joining
121420030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvg03032
]
121420030
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121420030
DNA replication proteins [BR:
lvg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
121420030
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
121420030
BRCA1-C complex
121420030
NHEJ (non-homologous end-joining)
MRX complex
121420030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
121420030
NCBI-ProteinID:
XP_041470489
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All DBs
Position
8:14487271..14513555
Genome browser
AA seq
703 aa
AA seq
DB search
MANSSSEDSDQEVQQLPGNLEDGDANTIKIMVATDCHIGYMEKDNIRHSDSINTFEEILQ
LARKNKVDMVLLGGDLFHENKPSRKSLHGVMTLFRKYCMGDRPVQIEFLSDQSVNFSASP
FPNVNYEDPNLNIDMPVFSIHGNHDDPAGLGNLCALDMLSVSGLVNYFGKSTSLESVEIS
PILLQKGTTKLAIFGLGSIRDERLHRMFLSGKISMLRPKQNADSWFNIFVIHQNRAKHGE
HNYIPEQFLDNFIDLVIWGHEHECLIDPVWNASQNFFISQPGSSIATSLSPGEAVPKHVG
LLQVRGKAMKCTKLKLETVRPFYLEDITLQDTTLDPNDVKITEKTVAFCTEKVESLIQKA
ADEHTGNRKQPDLPLIRLRVDYSGGFDTFNVNRFGQKFVGRVANTKDLIRFTKRRVQLKK
EDTKPGEDLGEFLKPEALETERVEDLVRKYFSETEESKQLELLSEKGLGQAVREYVDKEE
KEAIQALVKHQLTQTQGQLKTRRTTEDHIDDELHRFKEERRQMSEADVTNEVKAAIDEDR
SQRPDAYSQDYGGDSDDDSMVTGNGDASSRGRGRGRSGRGKGAAGSSATRGRGSRGGRGS
RGGRGQSSSSRGSAASKQSLLMTSFANAPLSSNRTKPGAIAFEDDDDDDMDSMPVSRNNK
TAKRKTTSNKVIEISDSSENDSDDPFSAMSSSNRSQAKRGRLY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggccaattcatcctctgaagattccgatcaggaggttcagcaactacctggaaacctt
gaggatggcgatgcgaacactatcaagatcatggtagctacggactgtcacataggatac
atggagaaagacaacatccgacacagtgactccatcaacacgtttgaagagattcttcag
ctggctcgcaaaaacaaggttgacatggtgttacttggtggagacctgtttcatgaaaac
aaaccttcaaggaagtccttgcatggggtcatgaccctcttcaggaagtactgcatggga
gacagaccggtccagattgagtttctcagcgatcagagcgtcaacttttcagccagtcca
ttccccaatgtgaactatgaagatccgaacctgaacattgacatgcctgtcttctctata
catggaaaccatgatgatcctgctgggctaggtaatctgtgtgctttggacatgctgagt
gtgtcgggtttggtaaactactttgggaagagtacctcactggaatcggtagagatctca
cccatccttcttcagaaaggaacaaccaaactagctatctttggcttgggttccatacga
gatgaacgtcttcatcggatgtttctatcggggaagatatccatgctgagaccgaagcag
aatgcagactcctggtttaatatctttgtcattcatcaaaacagagcgaaacatggagaa
cacaactacatacccgagcagttccttgacaactttattgacctggttatttggggtcac
gagcacgaatgcctgattgaccccgtatggaatgcatcacagaatttcttcatcagtcaa
cctggtagtagtatagccacatcattatcgccgggtgaggcagtgccaaaacacgtaggt
ctcttgcaggttcgcggtaaggccatgaagtgcactaagctcaagcttgagaccgtccgt
ccattctatctagaggatatcaccctccaagacaccacactcgatccaaacgatgtcaag
atcacagagaaaactgttgcattctgtacagaaaaggttgaatccttgatacaaaaagca
gctgatgagcacacagggaacagaaagcagccagacctccctctcattcgactaagggtg
gactacagcgggggattcgatacattcaatgtgaatcggtttggtcagaagtttgttggt
cgggtggcaaacaccaaggatcttatccgctttacaaagagaagggtacaactcaagaaa
gaagataccaaacctggagaagacttgggcgagttcctcaagccagaagccctggaaaca
gaaagagttgaagaccttgtccggaagtatttctcagaaacagaagagtcaaaacagctg
gaactgttgtcggagaagggtttgggccaagccgtccgggaatatgtggacaaggaagag
aaggaagctatccaagccctcgttaaacaccagctgacgcaaacacagggtcaactcaag
accaggagaacaacggaagatcacatcgacgacgagctgcatcgatttaaagaggagaga
agacaaatgagtgaagcagacgtcaccaatgaagtcaaagcagccattgatgaagatcga
agtcagagaccggatgcctactcccaggactacggcggagacagtgacgacgatagcatg
gtgacgggcaatggagacgcctcgtccagagggcgtggcagggggaggagcgggagagga
aaaggagcagctggcagctccgccacaagaggtagaggaagcagaggtggcaggggtagc
agaggaggaaggggtcaaagttcatcgagtcgagggtcggcagcttccaaacagagcctc
ctgatgacatcctttgcaaacgcacctttatcaagcaacaggaccaagccgggagccatt
gcctttgaggatgatgatgacgatgatatggattccatgccagtgtcaagaaacaataaa
acagctaaaaggaaaacaacgtcaaacaaagtgatcgaaatcagtgactcctcagagaat
gacagtgatgacccgttcagtgcaatgagctcgtccaaccggagtcaagctaagagaggc
agactgtactaa
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