Lytechinus variegatus (green sea urchin): 121420217
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Entry
121420217 CDS
T11173
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lvg01009
]
121420217
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121420217
Protein phosphatases and associated proteins [BR:
lvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121420217
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121420217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
121420217
NCBI-ProteinID:
XP_041470710
LinkDB
All DBs
Position
8:24636113..24655928
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AA seq
742 aa
AA seq
DB search
MAAPCGQSPHSVEIHFAQRLASNEKKIRDRAIKRLRHWIAARSQKNGNISNDELMKLWKG
LFYCMWMCDKPVIQEELADQISDMAHCFRRPGEACLFYETFLATMRREWIGIDHLRMDKY
LMLIRRSFRQMLVVLHNNEWEEELVKLFLMSLSRCALNPDMDACPDGLRYQLANVYLDEL
AREGTEDLSPQQASTFLFPYAELVAKTLNKKLRDVILQDIFQDVVERSSVGEAEEDEDEG
IASDEDRNKTSKKAVKQRKRKRKGKFDDEEDDEDEEEEEEEDDVDILEKVMFPEEMVPPL
EYDYAMIADKLFELASEKNIPTRNRKPIYRMVKRFQSLAKGVFPMPDLLKEIREDKDTDY
LKEELPWWKKLQEKEKRKNRRRKRRRGKKGGKGEGEGGGDDDDGEEDEEEEIVVKKKKKV
QQEDEEEMETDSKKKIKKQKKKEKMMTMTEESKEEDSESLAPADVDSQFTELKSTSAKGK
NKKGKRKGEDKTIVEEPVLSETAFAGEDAESEPSPSIKDGNQKRKKKKGKAKITDVNLEL
SEGSQTNSDIDSCLGENKSDTERIDGSALVDPHTPRTKSKKKGKKKGLALSGDTEDSNEL
GLNIVSKATEVISPQNEGSPKPFAAFDKVSTPVAYVKKAKKMTEPSTLPRTKAKSRVETQ
FSPPMTRKRVKIALSKNEFQPATDYKQRIKQSPGVPFDGTKKPAFSVLKQTPPKSEVRVP
KVKGSSKKQGKVGKRPKAKDFF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccatgtggacaatcgccgcacagcgtcgaaattcattttgctcagagactt
gcttcaaatgaaaagaaaatacgcgacagggcaatcaaacgattgagacactggatagcc
gcaagatctcaaaagaatggcaatatcagtaatgatgagctcatgaagttatggaagggt
ttattttactgtatgtggatgtgtgataaaccagtcatccaagaggagcttgctgatcaa
atctcagacatggctcactgcttcagacgcccaggagaagcttgcctgttttatgaaacc
ttccttgctaccatgcgccgtgagtggattggtattgatcatcttcgcatggacaagtat
ctcatgcttataagacgcagtttccgtcagatgctggtcgtacttcataacaacgaatgg
gaggaagaattggtcaagttgtttctgatgtcattaagtcgctgcgccctgaaccctgac
atggacgcatgtcctgacggcctccgttaccagcttgctaacgtttacctggatgagctc
gcaagggaaggcacagaggatctgagtccccagcaagcatcaacattcctattcccttat
gcagaattggttgcaaagactctaaataagaagctacgtgatgtgatccttcaggatatc
ttccaggatgtggttgaaagatcaagtgttggagaggctgaagaagacgaggatgaaggg
attgcttcggatgaggacagaaacaagacttcaaagaaagctgtaaagcagaggaaaagg
aagaggaaaggaaaattcgatgatgaagaagatgatgaggatgaagaagaagaagaggag
gaagatgatgttgatattttagagaaagtcatgtttccagaggagatggtcccgcctctt
gagtatgattatgcgatgattgctgacaagttgtttgagctcgccagtgagaagaacatt
ccaacccgtaacagaaaaccaatctacagaatggtcaaaaggttccagagtttggcaaaa
ggagtgttcccgatgccggacctcctgaaagagatccgggaagacaaggacaccgactac
ctaaaggaggaactcccctggtggaagaaactacaggagaaggagaagaggaagaacagg
aggaggaagaggaggaggggaaagaaaggtggtaaaggtgaaggagaaggtggaggtgat
gatgatgatggggaggaggatgaagaagaagagattgtggtgaagaagaaaaagaaggta
caacaggaagatgaggaggagatggagacggacagcaagaaaaagataaagaagcagaaa
aagaaggagaaaatgatgaccatgactgaggaatccaaggaagaagactcagaaagcctt
gctcctgctgatgttgactctcaattcacagagttgaaatcaacgagcgcaaaaggaaag
aataagaaaggaaaacggaaaggtgaggacaaaacaattgttgaagaacctgtcctgtca
gaaactgcattcgctggagaggatgcggaatcagagccaagccctagcatcaaagacgga
aaccagaagaggaagaagaaaaagggaaaggctaaaatcaccgatgtgaacctagaattg
tctgaaggatctcaaaccaacagtgacattgactcttgtcttggagaaaacaaatcagac
actgagagaatcgatggttcggcacttgtcgaccctcacactccaaggacaaaatctaaa
aagaaagggaagaagaagggtttggctttgagtggggacactgaagatagcaatgaactg
ggtttgaacattgtatcaaaagccacagaagttatatcaccacagaacgaggggtcaccc
aagccattcgcagcttttgacaaggtctctacccctgtcgcctacgtgaagaaggccaag
aagatgacggaacccagtacacttccaagaacaaaggcaaagagtcgtgtggagacacag
ttctccccaccaatgacaagaaagagagtgaagatagcattgtctaagaatgaattccag
cctgccactgactataagcagaggatcaaacagagtccaggcgtcccattcgatggaact
aagaagccagcattctctgtgctgaagcagacacccccaaagtcagaggtcagggtgcca
aaggtcaaagggtcatcaaagaagcaaggcaaggttggcaagagacctaaggccaaagac
ttcttttga
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