Lytechinus variegatus (green sea urchin): 121420240
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Entry
121420240 CDS
T11173
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121420240
03021 Transcription machinery [BR:
lvg03021
]
121420240
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121420240
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
121420240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
121420240
NCBI-ProteinID:
XP_041470742
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All DBs
Position
8:complement(25524190..25561659)
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AA seq
819 aa
AA seq
DB search
MADRAKEGDDERTGALIMSTETAENPPAKKSKNEVVMIQAGGGDASQQTRPQTSSTASAA
GTTSSTIPVSITPAQMVQVVASGSSAQPTLVHPTTVMTAQGLAAQGLAAQGLAAFQPQAA
QLQAIAGHLQQPQQFLVNPGAGQVLLQTLPFAQAGATPIALANLQGAQQVALATSAAQML
KSPANQLKMATMQSAAQQLQAAAAASTSQAQTSQTTTGTSQAVAAAAAQLATPIQTITTA
LTPQQLQLLQQQQVQVISPFPDLTKVWANQQQPQQQQQQQQQQNQQFQQRNQQQIQQQQQ
ALPQQQQQVQQQQQGLQQQKIAPQLPGQLQQISAQDLQQLQQLQQQNPNLQQYVFLQAPQ
VSTNMQQAQQLLLQQQQQQQQQQQNLAQQQGLLQQTHAGMIPQQSIIQAQAINAQQLQQQ
ALTAAGIQSVTAATATATTNAQSVTAGQQLQIQQAQKQGGGLASVTTPPIPSIPHSHIEE
QTDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
LKPLLQKWLDDADTTVANPALLGPHSSPEGINRRRKKRTSIETNIRVSLEKSFLQQPKPT
SEEIAILGEQLGMEKEVVRVWFCNRRQKEKRINPPVSSLNLQNLMAHHTSIASLNLSPGV
NQIQQSTPATPVTPSTPISTKIISSVGTPASNGPSATPVQAKTVAIQSSGRTIAVNLVSA
TNGQVAATPATTVTPIALTAVTPSTTGQSQMSLNAAAQRAILAAAVSQKAGTGNTVTTTT
VTPTLLQTANQLAALSGTNTNAVTSGTTPKSSSGAKYLL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagagcgaaggaaggtgacgatgaaaggacaggcgccctcatcatgagtacc
gaaacggctgaaaacccacctgcaaagaaaagtaaaaatgaagttgtgatgatccaggcg
ggaggcggagatgcatctcaacagacacgcccacagacgtcctccactgcctcggcagca
ggaactaccagctccaccataccagtcagcatcaccccagcacagatggtgcaagtggtg
gcttctggctcatcagcacagcctacattggtccacccaacgacagtgatgactgcacag
ggtctagcagcacagggtttagctgcccagggtcttgcagccttccagcctcaggctgcc
cagctccaagccatcgcaggtcaccttcagcagccccaacagtttctggtcaatcctggt
gctggccaagttctcctgcagacactaccctttgcacaggcaggtgccacccctatcgca
cttgctaatcttcaaggagctcaacaggttgcacttgctacgtcggctgctcagatgctc
aagtctcctgcaaaccaactcaagatggcaaccatgcagagtgcggcccagcagcttcaa
gcagccgctgcggcctccaccagccaggcccagacctcccagacgactaccggaacctcc
caggccgtggccgcagcagccgcccagctggcaacgcctatccagaccatcacgacggcg
ttgacaccgcagcagcttcagctcctgcaacaacagcaagtccaggttattagtcctttc
cccgatctcaccaaggtatgggcaaaccagcaacaaccgcagcaacaacaacagcagcag
cagcagcaaaaccagcaattccagcaaagaaaccagcaacagatccagcaacaacaacag
gcacttcctcagcagcagcagcaggtgcagcaacagcagcaaggcttgcaacaacaaaag
attgcgccacagttgccgggtcagttacaacagatctctgctcaagaccttcaacagttg
cagcaactccagcagcagaatcccaacctgcaacagtatgtcttcttgcaagctcctcag
gtgtccacaaacatgcaacaagcccagcaactcttgctgcaacaacagcagcaacagcag
cagcaacaacagaatctggcccagcaacaagggttgttgcagcagacgcatgccggcatg
ataccccagcagtctataattcaagcacaggccatcaacgcacaacagttacagcaacag
gcactgactgcggcgggaatccagtctgttactgctgcaacagccactgcaacaacaaat
gcccagagtgtgactgccggacagcagcttcaaatccagcaagcccagaagcaaggaggt
ggactggcctccgtgactacgccacccatccctagcattcctcacagccacatagaagag
cagacagatctggaagagctggaacagtttgcacggactttcaagcagaggcgaatcaaa
ctgggcttcacacagggtgatgttggcctggccatgggcaagctgtatggcaacgacttc
agtcagacaaccatctcccgctttgaagccctcaacctaagcttcaagaacatgtgtaag
ctcaaacctctactgcagaaatggttggacgatgccgatacaaccgtagccaatcctgca
ctcctaggtcctcacagtagtcccgaaggcatcaaccgccgcaggaaaaagcgtacaagc
atcgaaaccaacatcagggtgtcgctggaaaagagcttcctccagcagccaaagccgacg
tcggaagagatcgccatccttggggagcagctaggtatggagaaggaagtggtcagggtt
tggttttgtaaccggcgacagaaagagaagcgcatcaacccacccgtgtcgagtctgaac
ctccagaacttgatggcgcaccacacgtcgatagcatccttgaacctgtcaccaggggtc
aaccagattcaacagtccactcctgctaccccagttacaccgtccacacccatttccacc
aaaatcattagcagtgttggcacacctgcctcaaacggaccgagcgccacccctgtgcag
gctaaaactgtggctatacagtcatcaggaagaactatcgcagtcaatctggtgtctgca
accaacggtcaagttgcagcgacacccgcaacgacagtcacgccaatcgctctgacagcc
gttactccgtccacaaccggccagtcgcagatgtccctgaatgcagctgcccagagggcg
atattagctgctgccgtgtcacagaaagcaggaaccggcaacacagtcacaacgacgaca
gtcactcctaccttgttgcaaactgctaaccaactagcagcgctgtcaggaacaaatacc
aatgcagtgacaagtggaacaacaccaaagagctctagtggagcaaagtacttgctttag
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integrated database retrieval system
