Lytechinus variegatus (green sea urchin): 121420288
Help
Entry
121420288 CDS
T11173
Name
(RefSeq) fasciclin-2-like
KO
K06491
neural cell adhesion molecule
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121420288
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121420288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121420288
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lvg04515
]
121420288
04090 CD molecules [BR:
lvg04090
]
121420288
00536 Glycosaminoglycan binding proteins [BR:
lvg00536
]
121420288
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lvg00537
]
121420288
04091 Lectins [BR:
lvg04091
]
121420288
Membrane trafficking [BR:
lvg04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121420288
Cell adhesion molecules [BR:
lvg04515
]
Immunoglobulin superfamily
NCAM1/2
121420288
CD molecules [BR:
lvg04090
]
Proteins
121420288
Glycosaminoglycan binding proteins [BR:
lvg00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
121420288
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lvg00537
]
Others
121420288
Lectins [BR:
lvg04091
]
I-type lectins (Siglecs)
121420288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
PSI_induc_2
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
121420288
NCBI-ProteinID:
XP_041470797
LinkDB
All DBs
Position
8:28185794..28213581
Genome browser
AA seq
890 aa
AA seq
DB search
MRCKRVKMIIRTFLITAFLAKLGDSLIVTPRESYSRFEGDSGFFYKCENPDINGPQPRWE
DQQSNAITAGSGRVYVTETESSTECATPDTLCRFTRIHFRNVLSGDAGLYSCQAQGHQTI
TRNVQIFKNIEFPLYDGDEEEQSLIYNTTSTIYCTARPLDQGMEMFWTKDAGSVGSPTKF
IEAFGQLTVKNVEVDDEGEYGCTAHYPETTLSVAKYITVHVQVPPKWAGTLPAQRDVVIN
SDVTLVCVATGRPDPQVTWTHVMGSDREEITNIPNMYELSSVGNRQLRIINIQLPQDDNG
ITIECTASNDPLGARTSTAITHTIELNVLVPPVLTQQQIYTVDETAEGGNTRSFECAITN
FRSEATLSFRRGGLTAMHELELGSQPDDSRVVVTQNSATGALTLTITNIQREHEGTWTCY
AESPAGDVYVDHMLLVEYKPIIDQTRTPLTTVSWVGRLTNLTCVFFGYPLPTVKWTKNNV
ELIDGLDVTVIDGLPPGTSIIQITPEDEDFGAYFCNGSNTKGFLNHRQELTKAERPSAPV
GLRITDVTSSTMSIQFSPPNDDGSLLITGYTIEYKVRTDTRPTILEYESSASDEMTCRRM
ILPMLTGEELQCTNYCEDSQFYICCPVADRSICLDRPIYEGVIVVHLRGLRAQQTYEVRV
AARNELGPGDFSNIESRGTDLFSVPDPPIIISSRESDRRDRYILRWRPPYDDGGSKVNYY
HVKYSQSRDKDVTELSPRPVSVRVDGNATSVQLSPLNQGQYYFIELTAESNLGFSDPSYF
VIETAGTFFFMTTPPTRPRNAGFWGLFNENTTVIIIIVIVVLIFVFIIVTDVCCYCINDC
GLLMFICVTCCGKTAPSTRQEIELGENEYGTESVRDWDSLDEEKHRFEVR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagatgtaaacgagtgaagatgattataagaacatttctgattacggcattccttgcc
aaattaggagattcactgattgtgactccaagggaatcctattccaggtttgaaggcgat
agtggtttcttctacaaatgtgagaaccctgatatcaatggtccgcaaccgaggtgggaa
gatcaacaaagcaatgctataacagccgggagtggtagagtgtacgtcactgagacagaa
agctctacagaatgtgcaaccccggacacgctctgtcggttcacccgaatccattttaga
aacgttttgagtggcgatgcgggtctctattcgtgccaggcacaagggcatcaaacgata
acaagaaatgttcaaatcttcaaaaacattgaatttcctctctatgatggcgatgaagag
gagcagtcccttatctacaatacgacctcaacaatctactgcacagccaggcctctcgat
cagggaatggagatgttttggacgaaagatgccggctccgtcggaagtccaacaaaattc
attgaggcgtttggccagctcactgtgaaaaatgttgaagttgatgatgaaggtgaatac
ggctgtacggcccattatccagaaacaactctgagtgttgctaagtacatcactgtacac
gtacaagttccacctaaatgggctggtaccctcccagcccaacgggatgttgtcatcaac
tcagacgtgaccctggtgtgcgtggccactggacgacccgacccacaggtcacatggaca
catgtgatgggtagcgaccgcgaagagatcaccaacattccaaatatgtacgagttgtca
tctgttggaaataggcaactgaggattataaatattcaattgccgcaagacgacaatgga
atcacgatcgaatgtacagcaagtaacgaccctttaggagcaaggacaagcactgcaatc
acgcacaccatcgagctcaatgtgctcgtaccacctgtccttacgcaacaacagatatac
accgttgatgaaaccgctgaaggaggcaatacaagatcttttgaatgtgccattactaac
ttccgttcggaggctaccctctcgttcagacgtggggggcttaccgccatgcatgagctg
gagctaggttctcagcctgatgattccagggtggttgtgacgcagaacagcgctaccggg
gccctgactctgactatcaccaacatccaacgagagcatgaaggtacctggacgtgctat
gctgagagccctgctggcgatgtctatgtagatcacatgctcctggttgaatacaagcct
atcatagaccagacgaggaccccattgaccactgtatcgtgggtaggtagactgacgaac
ctgacgtgcgtgttctttggctacccgcttcccaccgtcaaatggacgaagaataatgta
gaactcattgatggtttagatgtgacggtcattgacggtctacctcccggaacttctata
atccagatcacgccagaagacgaggatttcggagcttacttttgcaatggctcaaacacc
aagggcttcttgaatcatcgacaggaacttactaaagcggagaggccatctgcacctgta
ggcctacgcatcacagacgtaacctcgtcaaccatgtccattcagttcagtccacctaat
gacgacggctcgcttctcatcactgggtataccattgaatacaaagtccgcacggataca
agaccaaccattcttgagtatgaaagttctgcatcagatgaaatgacgtgccgacgaatg
atccttccgatgttgaccggtgaagagttacaatgtaccaactactgtgaggactcccag
ttctacatctgttgtccggtagcagatcgcagcatttgccttgatagacctatttatgag
ggtgttatcgtggtccatttacgaggactgcgggctcaacagacgtacgaggtccgtgtt
gcagctagaaacgagctcggaccaggagatttctcaaacatagaatcgcgcggcactgat
cttttctctgtgccagatcctcccatcatcatttccagtagagagtctgaccgaagagat
cgctacatccttcgttggcggcctccttatgatgacggagggtcaaaggtcaactattat
catgtaaaatattcccagtctcgagataaggatgtaacagaactgtcaccaagaccagtt
agtgtccgcgttgatgggaacgctacatcagtacaactaagtcctcttaaccaaggacaa
tattacttcattgagctgactgccgagagtaacctgggtttcagcgatccatcctacttt
gtgatcgagacagctggaacattctttttcatgacgactcctccaacacgaccaaggaat
gcagggttttggggtctcttcaacgagaacaccacggtcattatcatcatcgtcatcgtc
gtcctcatctttgtctttatcatcgtcaccgacgtctgctgctactgtatcaatgactgc
ggcttgctgatgttcatttgtgtgacatgctgcgggaagacagcgccctctacgagacaa
gaaatagagcttggcgagaatgaatacggaactgagagtgtgcgagattgggatagtctg
gacgaggagaagcatcggtttgaagtccgttga
DBGET
integrated database retrieval system
