Lytechinus variegatus (green sea urchin): 121420316
Help
Entry
121420316 CDS
T11173
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03015
mRNA surveillance pathway
lvg04350
TGF-beta signaling pathway
lvg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121420316
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121420316
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121420316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lvg01009
]
121420316
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121420316
03036 Chromosome and associated proteins [BR:
lvg03036
]
121420316
Protein phosphatases and associated proteins [BR:
lvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121420316
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121420316
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121420316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
HEAT_EF3_N
Htt_N-HEAT_1
Cnd1
PDS5
Adaptin_N
CLASP_N
TOR1L1_N
HEAT_EZ
HEAT_ECM29
ARM_ARMC5
NopRA1
Ant-IIb_sub-bd
M11L
IFRD
Motif
Other DBs
NCBI-GeneID:
121420316
NCBI-ProteinID:
XP_041470835
LinkDB
All DBs
Position
8:complement(30132429..30171938)
Genome browser
AA seq
591 aa
AA seq
DB search
MASKEQQPTIGDDSLYPIAVLVDELRHEDVTRRLLSIKKLSTIALALGEERTRAELIPFL
TDTIYDEDEVLLALAEQLGTFTPFVGGQEHVSCLLPPLESLATVEETVVRDKAVESLRNL
SGEHSTADLENQFIPMVKRLAGGDWFTSRTSACGLFSVCYTRCKNTYKAELRSLFNNLCS
DDTPMVRRAAASKLGEFAKVVESEYVKSDLIPMFNNLASDEQQDSVRLLAVEACVNIASL
LPQKDKEDLIMPTMRGCAEDKSWRVRYMVADKFTELQDAVGPEITKNDLVRAFKGLLKDC
EAEVRAAAAHKVKAFCEHLSEDMREEAIMTELLPCIKDLVSDPNQHVKSALASVIMGLSP
ILGKERTIEHLLPLFLIALKDECPEVRLNIISNLDCVNKVIGISQLAQSLLPAIVELAED
NKWRVRLAIIEYMPLLASQLGVEFYDEKLNNLCMSWLVDNVYAIREAATLNLKKLVEEFG
SSWAQTTIIPKILAMSKDPNYLHRMTCLFSVNVLIDVVDQHVVKNLMLPTIISLVGDPVA
NVRFNVAKTFQKMVPLIEKNSQSDIKAALDKLNADSDLDVKYYASEALTVM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaagaacagcagccaaccattggagatgactccctgtatcccatagctgta
ctcgttgatgagctgagacacgaagatgtaacgaggagactgctaagcattaaaaagctg
tctacaatcgctttagcattgggtgaagaaagaacaagggcagaacttataccattcctt
acagataccatttatgatgaagacgaagtccttttggcattggcagagcagcttggtact
tttactcccttcgtcggtggccaagaacatgtatcttgtttattgcctcccctggaaagt
ttagccaccgttgaagagaccgtagtgagggataaagccgtggaaagcttgcgtaatctt
tccggtgaacacagcacagctgacttagagaatcaatttatcccaatggtcaaacgtctg
gcgggtggggactggtttacatcacggacgtcggcatgcggcctctttagcgtctgttac
acaagatgcaagaatacgtataaagcagagttaagatcactgttcaacaatctatgtagt
gatgacacccctatggtaaggagagctgctgccagtaaactgggtgaatttgccaaagta
gtagaaagcgaatatgtcaagtctgatctcattcctatgttcaacaacctagcgagtgac
gaacagcaagactcggtgcgactgttagccgtggaagcttgtgtgaacattgcctctcta
ctgccgcaaaaggataaggaagacctcatcatgcccactatgagaggctgcgcagaagat
aagtcatggagagtgcggtatatggttgcagataagttcacagagttacaagatgcagtg
ggtcccgaaataaccaagaacgacctggtgcgggccttcaagggtctcctgaaagactgc
gaggcagaggtcagagcagccgctgctcacaaagtcaaggcgttctgtgagcacctgtcc
gaagacatgagggaggaggccatcatgacagagcttctgccctgtatcaaggaccttgta
agtgaccctaatcagcatgtgaagagcgctcttgcttccgtcatcatgggactttcgcct
attcttgggaaggagaggactatagagcacttgttaccgctgttcttgattgcactgaag
gacgaatgccccgaggtcaggctgaacatcatcagtaaccttgactgtgtcaacaaggtc
attggcatcagccaactagcacagtccctactcccagccatcgtagaactggcggaggac
aacaaatggagggttcgacttgctatcatagagtacatgccactactagcttcacaactg
ggtgtagagttctatgatgaaaagctgaataatctatgtatgtcatggctcgttgacaat
gtatatgccatcagagaagctgctacactcaatctcaagaaacttgtagaagagtttggt
tcatcatgggcacagactaccattatcccgaagatcctagccatgtctaaggatcccaac
tatcttcatcgtatgacatgtcttttctctgtcaacgtcctcatcgacgtcgttgatcag
catgtcgttaaaaatttaatgttgcctactatcatctctcttgttggcgatcctgtcgcc
aatgtccgctttaacgttgccaagactttccagaagatggtaccactcattgaaaaaaac
tctcaaagcgatatcaaagcggcgctggataagctgaatgctgattctgatcttgatgtc
aaatattatgcttcagaagctttgacagtgatgtaa
DBGET
integrated database retrieval system
