Lytechinus variegatus (green sea urchin): 121420408
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Entry
121420408 CDS
T11173
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121420408
Membrane trafficking [BR:
lvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121420408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
C1_1
RGS
PH
SOS1_NGEF_PH
DUF7491
Motif
Other DBs
NCBI-GeneID:
121420408
NCBI-ProteinID:
XP_041470960
LinkDB
All DBs
Position
8:34037543..34139048
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AA seq
1844 aa
AA seq
DB search
MGLLRRSTNVSHEASCDCNRCRSLSQSPGSHSPLPFRTQRNFFSARVNKTSQQDAQVKSE
RLNTFKRMLEQERTLLDHTENEYLNNPSEKLQKDINGIKTRISVLEKQLTKAANNMIQNK
AGGSNNQQSSTSAHLPVYTATEGQHASASDHTNMNEEFQPIPEEKKNVKATDVKRPWLPQ
GISHHRQRSSPETFTRINNQSPTAGVKRNNSDAQAKEVARQKVRDGKVNVVEPLNRDKKQ
KKDIEAIGRTKSLPGETMDPEFEDGEAATSKMLGMEAVTPMEGVVETSLIESDHARVMTD
TADMPQFHMPTVVQPEMFNAPAVSELHSLHAPGPTPQGQKNIMCMDEDDFQSDNEPVPPV
PPELEDHGPFNDLEQLQKKSAHMAVFLHYLISNSDPSSLFFYLVTDSYASGNLRDMKKWV
YDIFSTFLGSGGPLRIQMSESLVNNIEHTINTQQNNEEAMRNVFIAARNLAKEEVDDLLA
DFRHKRALGLGSIFGDQYLTNEDMDKAQELKIVESTLLPHLDRLTTSEAEKEPKNQALAA
ALNTFMKQAGVKNQTSSALERAPSFMTKDRRGPLKFPRSTKKQSVKGHVFQENQYLNTTF
CNQCNGLLWGIGYQGLQCTYCEFNIHKSGPCLEHITTECPGKKKKKEKDKEHRRTRMNFP
NVVANNQGKDDSKSTANPISPTSNVIHMKGDNEELAQMKQEMHNAQVAKNIDVSNMVDQF
EKQDNLSVSADSGISSLASLDNQTQGDDHREVSKQPKQKRNIIKRSASLKSKKPSPTSLE
SEHHKKKKNFIKRSSSLKLKGEEKKEGRRINENKRSRSIEPGSHTKSIEISDVDMDGQTV
AAVLSPSQASSSSSLSTNRSQDSPRTSLEHLSRAVEEDDSDIEAEANTPNWQKMIDKDIV
RKLKPKEVKRQEVINELFHTEKTHVRSLKVLRKVFYLPMLDQEIVGLTRETINFIFPNID
EMIEIHGTLNNAMKREKRTSHIIQEVSQILLERFNGEAGETMKRVCAVFCQNQSIAMEHL
KKLVKKEKEKEKDKKEGSLSRFMDEAEGNPLCRRLPLPGIVATGYQRLTKYPLLIENLLK
YTPPKSPEYERLGRALDKSKEILSYVNQAVKESENRFRLVDYDSRMDRTPLDKSNNPLVT
DYKNFSLAQYKMIHDGVLTWKVNRNKSIEVQVLLLEELIVLLSKQDEKLVLKLHSTTNQA
REELKTHSPIIKLSTVLCRPVATNKKAFFLVSTSSAAGPQIYELCTNSSQERQSWMDVIH
TTQETERKQSKGGRRNARITPNPRPLPPELHPVYEETSKPAEKPEINDPPEVVNNVVIAP
QPEVVTLNNSSDTKSDSESTEDIRTALEKSINQVPGEEASISERLQSSLHIVNRSIPVLD
EAVGESTENVLLVKALNLLSKQLAELNEKRHLEELEMKKLKEENSNLQSDYDELKAERRQ
LTGELTVMKHELGNLQPDPLQNNPGSVDSIPNTVDEDRLMTDKQRNRQSYSGDSSATESE
DSKTVESSDPEEATVVVDDENKSLNEQDSDVPVTPNEMVQPEIFHADTQLVKPVVNEQLL
ELQSAAGLPSERTENEESAVCVPEALVTEDIANGLEELKISESNQDYENGNEKVGVGVED
ECAEEENNVDAVGDEANSEVQKLNAAVDVNSNPNVSTESVSQDDTISEEGETENAPVTVD
ADTKDSSLGDADLTTQEFEASDEHQTLDELVSSTKEEPDSHPCLIEVVDNDIPNAEDIVS
SVEEKTQDNVELTPEEEQKLQTIKSDVIPTTVLTTVPEQTQLDSREGGSRPVSLISEDSA
SSDVLISGSTEEIEDTTDAGRPGDRNSQGSDDVSNDNEKHCMLS
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcttgcgcaggtcaaccaacgtaagccatgaggcatcctgcgactgcaaccgt
tgtaggagtttaagccaatcaccgggcagccactctccacttcccttccgtacccaaaga
aatttcttctcggcccgcgtgaacaaaacgtctcaacaagacgctcaagtaaagtctgaa
aggttaaacacattcaaacgcatgctggagcaagaaaggacgttattagaccacacggaa
aatgagtacttgaataacccatcagaaaaactccaaaaggacattaatggaattaaaacg
agaataagtgtactcgagaaacaacttacgaaggctgctaataatatgatacagaataag
gctggtgggagcaataatcagcaatcgtccacctcagcccatttgcccgtgtatacagcc
acggaggggcaacacgcatcggcttcggatcacacgaatatgaacgaagaattccagcct
attccagaagagaaaaagaatgtaaaagctactgatgtgaaacggccttggttaccgcaa
ggaataagccaccacagacagagaagtagtccggagacgttcacccggatcaacaaccaa
tcgcctacagcaggggtcaagaggaacaactcggacgcacaggccaaggaggtagccagg
cagaaggtcagagacggcaaggtcaacgtggttgagccactcaacagggacaagaaacag
aagaaggacattgaggcaataggaaggaccaagtcattaccaggagagacgatggatcct
gagtttgaggatggtgaagcagctacctctaagatgctaggcatggaggcagtcactccc
atggagggagtggtggaaacaagtctcatagaatcagatcatgccagagtgatgaccgac
acggcagacatgcctcagtttcacatgcctaccgtcgtacaaccggagatgttcaacgca
cccgctgtctcggaactccactcactccatgcccctggaccaacgccccaaggccagaag
aacatcatgtgcatggatgaagacgacttccaatctgataacgaaccggtgcctccagta
ccccctgaacttgaagatcatggaccattcaatgaccttgagcagctccagaagaaatca
gcacacatggctgtattcctccactatctcatctcaaacagcgacccttcaagtttgttt
ttctacctagtcacagactcatacgcaagtggaaacttgagggatatgaagaaatgggtt
tatgatatcttctcaacatttcttggaagtggagggcctctgaggatacagatgagtgaa
agtcttgtcaacaatatagaacacaccatcaacacacaacagaacaatgaagaggcgatg
aggaacgtcttcatcgccgctcgcaacctagccaaggaggaggtcgatgatctcctggct
gacttccgtcacaagagggcgctagggcttggttccatcttcggagaccagtacctaact
aacgaggatatggacaaggcacaggagctgaagatcgtagagtcaacgttattaccccat
cttgataggttaacaacatctgaggccgagaaggagcccaagaaccaagccttggctgca
gcactcaataccttcatgaagcaagctggggtgaagaaccagaccagtagtgccctagag
agagctccaagcttcatgaccaaagacaggagaggacctcttaaattccctcgctctacc
aaaaagcaatctgtgaaaggtcatgtttttcaggagaatcagtacttgaatacaacattc
tgtaaccagtgtaatggattactgtggggtatcggctaccaaggactacaatgtacatat
tgtgaattcaatatccataagtcaggtccatgtctagagcacataacgacggaatgccct
ggaaaaaagaaaaagaaagagaaggataaagagcatagaagaaccaggatgaatttccca
aatgtcgttgccaataaccaaggtaaagatgactccaagtcaacagccaatcctattagt
ccaaccagtaatgtgattcacatgaaaggagataatgaggaactagcgcaaatgaaacaa
gagatgcacaatgctcaagttgcgaagaacattgatgtctccaacatggtggaccagttt
gagaagcaggacaacctgtcggtctcagctgacagcgggatatcatcactggcctctctg
gacaaccagacccagggtgacgaccatagggaggtaagcaaacagcccaaacagaagagg
aacatcatcaaacgatcggccagtctcaagtctaagaaaccctcaccaaccagtctggaa
tccgaacatcacaagaagaagaagaattttatcaaacgatcatcaagtctaaaattgaag
ggagaagagaagaaagaaggaaggagaattaatgagaacaagagatcaagaagcattgag
ccaggcagccatacaaaatcaattgaaataagtgatgttgatatggatggacagactgtt
gcagctgtattatcaccatctcaagccagttcatcatcaagtctatcaacaaatcgaagt
caggactcgccgaggacatcattagaacatctatcgcgagccgttgaggaggacgattca
gacattgaagccgaagcgaacacacctaactggcagaagatgattgacaaagatatcgtt
aggaaactcaaaccaaaggaagtaaaacggcaagaggtcatcaatgaacttttccacact
gaaaagacccatgtcagaagtctgaaggttctaagaaaggtcttctacttacccatgtta
gaccaggagatcgtaggtctgacgagagaaacaatcaacttcatcttcccaaatatcgat
gaaatgattgaaattcatgggaccctaaataacgccatgaagcgggaaaagagaacgtcg
catattatccaagaagtcagccagatacttttggaaaggtttaatggtgaggcaggggag
acgatgaagagagtgtgtgccgtgttttgtcagaaccagagtatagccatggagcatctc
aagaaactcgttaagaaggagaaggagaaagaaaaggacaagaaggaggggtccttatca
aggttcatggatgaagccgaggggaatccattatgtaggagattaccactgccaggcatt
gttgctaccggataccaaagattaaccaaatatcctctactcatagaaaatctactcaaa
tacacacctccaaaaagtccagagtacgagcgactcggacgcgccttagacaaaagcaag
gagatcttgtcgtacgtcaaccaagcagtgaaggagagtgagaacaggttccgtcttgtg
gactacgactcgaggatggataggacgccactggacaagtccaacaatcctcttgtcacg
gattacaagaacttcagcctggcgcagtataagatgatccatgatggcgtcttgacatgg
aaagtcaataggaataaaagcatagaggtccaagtgttattactggaagagttgatagta
cttctatcaaagcaggatgagaagctggtcctgaaactccattcaacaacaaaccaagca
agggaagagttgaagacgcacagtcccatcatcaaactcagcacagttttatgcaggcca
gtagctacaaataaaaaagccttctttcttgtcagtacctcgtctgcggctggtcctcag
atctacgagctctgtacaaactcctcccaggagagacaatcctggatggatgtcatccac
accacgcaggagaccgaaaggaagcagtccaagggagggcgtcgtaacgcaaggataacg
cccaatcctaggcctctaccgccagaactacatcctgtgtatgaggagacctcaaagcct
gcagagaagcctgaaataaatgacccacctgaagtggtcaacaatgtggtcattgctccc
caaccagaagtggtcactctgaacaacagctcagataccaaatcagattctgaatcaact
gaggatatcaggactgctctagaaaaatcaataaatcaggtacctggtgaggaagcctct
atctcagagagacttcaaagttcacttcacattgttaatagatcaataccagtactagat
gaagctgttggggagtcaacagagaatgtactcctagtgaaggccctgaacctattatca
aagcaacttgctgaactcaacgagaagcgtcatttagaggaacttgaaatgaagaagctg
aaggaggagaacagcaacttacagtcagattacgatgaattgaaagctgaaaggagacag
ttaacaggagaactaacagtcatgaaacatgaactgggtaacctgcaacccgaccctctc
cagaataaccctggatccgtagactctatcccaaatactgtcgatgaggacagactaatg
actgacaagcaacggaatcgccaatcttactctggcgattcgagtgctaccgagtcagag
gattctaaaacggttgagtcgtcggacccggaggaagcgacggttgttgtggatgatgag
aataagagtttaaatgagcaggattccgatgttccggtgacgcccaacgagatggtacag
ccggagatcttccatgcggacactcagttagtgaaaccggtagtgaatgagcagctcctg
gagttgcagtctgccgctgggttacccagtgaaagaactgaaaacgaggagtcagcggtg
tgtgtaccggaggccttagtcactgaggatattgcaaatggacttgaggaactcaagatc
agcgaatcaaatcaagactatgaaaatggtaacgagaaggtgggtgttggggtggaggat
gaatgtgccgaggaggagaataatgtggacgcggtcggagatgaagcaaattctgaagtg
caaaaattaaacgcagcagtagacgttaacagtaaccctaatgtaagtactgagtcagtc
agccaagatgatacgataagtgaagaaggtgagactgagaacgcaccagtgactgtcgat
gctgacactaaggattcatcattaggtgatgctgatcttacaactcaagaatttgaagca
tctgatgaacaccagacccttgatgagttagtatcttccaccaaagaggagccagactcc
cacccgtgcctgattgaagttgtggacaatgatatccccaacgctgaagacattgtctca
agcgtagaggaaaagacccaagacaacgttgagcttaccccagaggaagagcaaaagcta
cagaccatcaagtcggatgtaatcccgacaacagtcttgacgacggtcccggagcagacg
cagctggacagtagggaaggtggtagccgaccggttagccttatctcagaagactccgca
tcttcggacgttcttatcagcggatcaacggaggagattgaagacaccactgatgcaggc
agaccgggagacaggaattcacaaggttcagatgatgtctctaacgataacgagaagcat
tgtatgttatcatag
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integrated database retrieval system
