Lytechinus variegatus (green sea urchin): 121420952
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Entry
121420952 CDS
T11173
Name
(RefSeq) autophagy-related protein 13-like
KO
K08331
autophagy-related protein 13
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04136
Autophagy - other
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121420952
04136 Autophagy - other
121420952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121420952
03029 Mitochondrial biogenesis [BR:
lvg03029
]
121420952
Membrane trafficking [BR:
lvg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121420952
Atg1 complex
121420952
Mitochondrial biogenesis [BR:
lvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121420952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121420952
NCBI-ProteinID:
XP_041471445
LinkDB
All DBs
Position
9:complement(37873719..37896466)
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AA seq
474 aa
AA seq
DB search
MMGRAMDGQQPSHGITEKEERDLRKFTKFLALKAIQVIVQARTGEKTDTRSKSNTDGTDW
FNLAIPEKANVKSHAKKLLMTEIPRAGYPLNVEITLETAEGDKMVLESWSLAVNDTCDPN
TKIHYTVYNRMGLLLKSLICVSRVTPAYRIARRQGTGDYRILSRVFFGETKLALLGEDFS
TIQVGSVPTPVGTIIVNVAYRTKLTLSTSRHISRIRGPVPVKDDHYSTSPSHKGPGPALP
VGTKPIIGIEDSSTTLESSQDYIIGSFSTTPPDNYVFPSRGDQTTPSPIRGRGLAEDRGR
GSAEDRTKPLSSNSFDLAGKLGPFASPKNVGDSESLISDDIPFGSLLQEVGSSTADKFIL
TTNDDPTSQDGDQPDWTGLNLSQHSNKSSLPSDSDDFVMVDLNPAFAKTDSSSDIVAFCC
QFQQAPPLELFEDQPTLGETLSNLPEKLAQFKENESEFDAFVASLQRDVDECSD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaagagctatggacggtcaacaaccctctcacggaatcacagagaaagaggaa
agagatctcaggaaattcacgaaatttcttgctttgaaggcaatacaagtgatagtgcaa
gcgagaacgggagagaagactgatacaagatctaaatcaaatacagatggtactgattgg
ttcaatctggcaattcccgagaaggccaatgtgaaatcacatgccaagaaacttttaatg
acggaaataccgagggcgggctatcctctcaacgtagaaattacccttgaaacagcagag
ggtgataagatggtgctagaatcgtggagcctcgctgtgaacgatacctgcgaccccaac
accaagattcactacaccgtatacaaccgaatgggtctcctcctcaagtcactgatctgc
gtatcaagggttactccagcatataggatagctagaagacagggtaccggggactatagg
atcttgtcaagggtgttctttggagagacaaagcttgcgctgctaggagaagatttcagt
acgattcaagttggtagcgtacccactcccgttgggactatcatagtcaacgtggcttat
aggaccaaactcactttatcaacatctagacacatttcaagaataagaggacctgtccct
gtcaaggatgatcattacagtaccagtccttcccataaaggtccaggaccagccttgcct
gtgggaaccaagccaattattggaattgaagactccagtacaaccttggagagctcacag
gattacatcatcgggtccttctccaccactcctcctgataactatgtcttcccttcacga
ggagaccagaccactcccagtccaatcagagggcggggcttagcagaagacagggggcgg
ggctcagcagaagataggaccaaaccactaagttcaaatagttttgacctcgctgggaag
ctaggaccctttgcaagtccaaagaatgttggagactcggaaagcctcatctctgatgac
attccgtttgggtccttactccaagaggttgggagtagtacggcagataaattcatcctc
actactaatgatgatcctactagccaagacggtgatcaaccagactggacaggattaaat
ctctcacagcattctaataaatcaagcttgccatcagatagcgatgactttgtcatggtg
gatctcaatccagcttttgccaagacagattctagtagtgacattgtagcgttctgctgc
cagtttcagcaggctccacctctagaactctttgaagatcaaccaacacttggagaaaca
ttgagtaacctaccggagaagctcgcacagttcaaggagaatgagtcagagtttgatgcg
tttgtagcaagccttcaaagggatgttgatgaatgcagtgactga
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