Lytechinus variegatus (green sea urchin): 121421298
Help
Entry
121421298 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121421298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121421298
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121421298
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
HECT type E3
121421298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121421298
NCBI-ProteinID:
XP_041471910
LinkDB
All DBs
Position
1:complement(69542891..69585608)
Genome browser
AA seq
3170 aa
AA seq
DB search
MSRNSKMTTVHFVVHPLPGTEDQLNDRLRELSEKLYRQPAPCASGVLPLKNLPVKSITVG
PNHAAFLLEDGRVCRMGFSINPEKVDSGPTKSESSKSSKKSWASSAQLSSARSSSSSSSS
SRPTNPLNPWLINADEPSGVSSSKWSSNCRTPSNRTTSNNNSSASRNRGRVIRAHSRGRG
GVIVGTRPVVPASVVPEELVSQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDED
GEDPEENDTYLSGGDDLVSLLDGGIHSDHPSVIIDADAMFSEEFLGLPPSRSRARGSSSR
DRDRDAERDPLLRSRERRWPEIVLRDTGSGASNMKAGSSEAAGSSDSRRGGAAGHSQNPV
VIGEDLEWWSEKGEEAPRFVSIGAMYSELIAVGQNGLMYQWKWSDPEPYKNPENTGVHHP
KVPFLGLVGEKISQIATCFEKSAILTESGKIATMIDETLSPIASRLEHPATVYQEFACDK
IVSIHTCALYTCTWMESGHIFWWGVLPLALRSKVLEKARDRARAKKREAMASASLTAGTQ
VCLRSCPMYHCGALAFNVKSAPPRVGQLMDTAWHLTDTCRFRIRRSSLDLSDTSTTGGSS
TSGASTSASLPQASRDTKDETKGDGGKADARGDAKTDANRLDVKQEMGPPPSPASTSSDV
SIVSSPAAHRRGSKRPLSSPAREVEKNDIEVWALTDVVFVEDIRSAPIGKVLKVDGAYAA
VKFPSLDSSAESSGDVDSFLQDCRLLRKDELQIVKQGSGPKVPDCFQRAPKKLNVPSNGQ
ILAVSVDFRGVHVLVKVRSELLYQLYELCSSRPTTESPFPTDTNAFMGKSIDNIRLHNPG
KDSVTLLQDGNNTLYPLAKTATVTIRDPNWVDLPPIRSLSMGVHHLPHPGQSTNIKSKAA
IMVMAIENQLLMPHVLRCDYEAVSHFLSNLQLEPNPAIKEQKLQHLVEERCDGGRNIFHA
CVSLCRPLSNQTNNSSTESSSLATLTSEVSSRAKMLCNALHTLSNAIAGAAMASGSGPSS
HGIGMRDAMSRGGSSSSAQPAGPSGIPGDDGRESASSPLPTAPIPTLSWPPEPSGLYMDQ
DEDNLSLGSTSATVGGSSSSLASNPPSLATSMSYTQAVALTPEERRSNAHSILRLLCEAA
ALTERLPDFLSAKDSHGNTPFMSAVKIRAYSVALTIFDTTENLASRRRPLTRTQPGSQGG
GGSQKREEQPASFNKELFESMVFPPGSHPDSSPLYVLCHNDTCSFTWTGTEHINQDIFEC
RTCGLLGPLCCCTECARICHKGHDCKLKRTSPTAYCDCWEKCECKALIAGQIFTRMELLD
RLINETNLVTIPNSRGDHILLFLAQTVARQTVEQRQYRQSRSRLSRKNESDIDMPDHNLE
PPRFCRHALESILQEWQAVSAMILNGCQDKKKDCGGGSGHTPIPEDQVYLMRQSGTVKLD
WFTHMLIVKCTSSDLDTLLTTLIRRLRHAQSATSKAEAAEVARRFIRSVARVFVVLSIEM
TPGKKLSEPVQRCKRVFQALIHQSITELCEIGDSLIAPVRMGVARPSSPFPLFNSHADAI
QGSEELFFTEPLPMRSASSNQSSSSHTHHHAPSLRTHPHRITRNRTIDEDDQDMEVGEGE
EIDMVEGDIVVVSSDVRERDSSSAPPRDPREQPSQDDQQEDDAGNESDMDLDLLAESDYD
SESNHSNQDQESSAQDSSRRGGVNAPNAGSDAGGGLASLFFSEDESSSNADEAEEEEEED
SDNEFNEIEEETVDQAFNEDSLERPTTASASGSQNIEGNRSSQPPHPLQWAFRNQQPLSS
NNSRTSGSGVVNEVLGSASTAPPVVPTGLIYIDPSNLRRTTISTAANPTPPTTNTTETAP
TTTASRLARAFGIVLRQVSDLMTSLPNYKAPEPLTETLEITADNAKELQNYVQCSLKPTW
DWLVCVMNSTEAQLRYGKALMGATDPSHPSHPMRSQYMRTLRGAARDAAAREETAYQHSL
ESRRRGTHNNTEEHGSMMDYLTYVLSLMRSHNSEHLGSLPMLDIAAMKHIAYVLDSCIYF
LRCFEREPLSEPSQASSSKRSWCFSQDVDGGETSDSNMDVDGAEEDRLATSGRKHPFFVR
SDSTTFLGCPPPDPIETPLSEALPLADRPHLLQPSATKEQLFGMPQNPVLPTDSEVALGH
NQSVTVHQSFLEILPTQMSVSQRQVLGQPGMDDDQEEEEDEEDGIEENEDGAAAGPSTLP
SNGPPAPQAQGEEERTETQESSSVTSGAVSAATGSTLPVSQSLGESSDLYQPSGPSFSSS
SFSGPSSDYSQSSAASASAASAAKPIFQDQPRNLSGVIQGSSAQESPGPSHGSESEGGDS
VPSALDVAGSSSSQASSAGPSGVNTAGGASATVVSVIRTTGSVDKSAGDPQAHSSGSREP
LVNQPGPVRVSEIPLPPDPVRDSSEEYSGASRNVSLGALFHVGGEESVQASPMNLSESAH
SGQAAEPSALELSNHETGERSRPTSATRDLDGADPEDGGRRKSSGRGGPTTITVDRADIQ
PVSDIDQVIRLTRPLSPLLSADMLLGRWRLCLELFGHVFLEDVGAEPGSVLSELGGFEVK
ESRFRREMEKLRNNHTSKDLTLEVERSRDLLIQQTMRQLNTHFNRRSSSNLAGLPLAVHR
VKVTFKDEPGEGSGVARSFYTAIAEALMSQERLPNLDDCQGSNKGPQYSLIQRLRSRERE
RERQRRSELRTGSGRMAQSLDRDRNTLSYDARPFYPRDSANSDDRSADYEPLPPSKQALG
ERLFPRVYALQPSLASMITGMLLELPPARLLLLLASEESLRERVEEAVDIILSRGSRDDP
SDSSRLDLDIFGLGEREKSKNESSGSTSSAMAIETEDCDDADRDGEALFFQPGKRGFYSP
RPGKNTGERLNVFRNVGRILGFCLLQNELCPLTLNRHVIKFLLGRKIGWHDLAFFDSTLY
EGLRQLLLDAERGHAASIAAMELTFSIQLSKEEGGQTVDLIPGGSRVSVNTDNIFEYVRH
YAEYKMVTVAHKCLTSMRQGLFDVLPRNSMDGLTAEDFRLLVNGCGQVNVQMLISYTTFN
DETGKLGDGHSNEGNDKLSTFKLWFWSIVEKMTTQQKQDLVYFWTSSPSLPASAEGFQPL
PTITVRPPDDNHLPTANTCISRLYIPLYSSKAILKKKLLLAIKTKAFGFV
NT seq
9513 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaaactcgaagatgactactgttcactttgttgtccatccattacctggcaca
gaagaccaactgaatgacagattgagagagttatctgagaaactgtacaggcaaccagca
ccatgtgcttcaggagttttacccctgaaaaaccttccagtgaaaagcataactgttgga
ccaaatcatgcagcttttcttcttgaggatggtcgtgtatgtcgtatgggattctcaatc
aaccctgagaaagttgacagtggtccaaccaagagtgaaagctccaagagcagcaagaag
agctgggcctcctctgctcagttatcttcagctcgttcttcatcatcttcatcatcatcg
tcacggcctactaatcctcttaacccttggctcatcaatgccgatgaaccttctggagtt
tcgtcgagtaaatggtcctctaattgccgtaccccatccaatcgcacaacatcaaacaac
aactccagtgcttcccgtaatcgagggcgtgtcatccgtgctcactcccggggtcgtggt
ggggtgatagtgggtaccaggccagttgtcccagcatctgttgtccctgaagaactggtg
tcccaggcacaggtagtcctacagggcaagagcaggtcggtcatcatcagagagctccaa
aggacaaacctggatgtcaacctggcagtcaacaacctgttgagccgtgatgatgaagac
ggtgaagacccagaggagaatgacacctatctgtctggtggtgatgaccttgtctcactc
ttggatggcggtatccactcggatcatccaagcgtcatcattgatgctgacgccatgttc
tcggaggagttcttgggcctaccgccatcgaggtccagagctagaggatctagcagtaga
gatcgtgatcgtgatgctgagcgagatccgctgctgcgtagccgggagcggcgttggccc
gagattgtactccgagataccggatcaggagctagtaacatgaaggctggtagctcagag
gcagcaggatcgtcagatagcagacgtgggggagctgcagggcacagccagaaccctgtg
gttattggagaggatctagaatggtggtcagaaaagggtgaagaagcacctcgatttgta
agcattggtgccatgtattctgagctgatagctgtgggtcagaatggccttatgtaccaa
tggaagtggtcggatccagaaccatacaagaatccggagaacactggagtacaccatcct
aaggttccattcctgggtctggtaggggaaaagatatcccagatagccacctgctttgag
aaatcagcaatcctgactgagtctggaaagatagcaacgatgattgatgagaccctatcg
cctattgcatctagacttgaacatccagccactgtgtatcaagagtttgcctgtgacaaa
attgtttccattcatacctgtgctttatatacctgcacctggatggaatctggccacatc
ttctggtggggtgtgcttcctttagcactgaggagtaaggtcttggagaaggctagagat
agagccagagcgaagaaacgtgaagctatggcatcagcttcattaactgctggaacacag
gtctgtttacgtagttgccccatgtaccactgtggtgcgttggccttcaacgtgaagagt
gccccacctcgagtaggtcagttgatggacactgcctggcacctgacagacacctgcagg
ttccgtatacgtcgttcttccctggacctgagtgacacttccaccaccggcggatcctct
accagtggtgcttccacctcagcaagcctccctcaggcaagccgagataccaaggatgag
acaaagggagatgggggtaaagcagatgctcgaggagatgctaagactgatgcaaatagg
ttagacgtgaagcaagaaatgggaccaccaccttcacctgcttctaccagcagtgatgta
tccatcgtgtcgagtcctgcagctcataggagagggtcaaagcgccctttgtcatctcca
gctagagaggtagagaagaacgatatcgaagtttgggctttgactgatgttgtgtttgta
gaggatatacgctcggctcctattggaaaggtgttgaaggttgacggtgcttatgctgcg
gtcaagtttccctctctagattctagcgctgagtcttcaggggatgttgattccttccta
caagactgcagattgcttcgcaaggatgaactccagattgtcaagcagggctcgggtcca
aaggtgccagattgtttccagagagctccaaagaaactcaacgtcccttcaaatggacaa
attcttgctgtgtccgttgatttcagaggtgtgcatgtcttggtcaaagtgagatctgag
ctcctgtatcagctgtatgagctgtgctccagtcgccctacgacggagagccccttccct
accgataccaatgctttcatgggaaagagcattgataatatacgactgcacaacccaggc
aaggactctgtcaccttactccaagatggaaacaacaccttgtatccgttggctaagacg
gctactgtgacgatcagagatcctaactgggtcgaccttccacccatccgcagcctgagc
atgggcgtgcatcatctccctcaccctgggcagtctactaacatcaagagtaaagcagct
atcatggtcatggctatagagaaccagctgttgatgccccatgtactgaggtgtgattat
gaagcagtctctcatttccttagcaatcttcaattagaaccaaatcctgcgatcaaggag
cagaagctacagcatcttgttgaggagaggtgtgatggagggagaaacatcttccatgcc
tgtgtcagtctatgcaggccactctcaaatcagaccaacaactcatcaacggaatccagc
agtctggctactttgacctctgaagttagcagccgtgctaagatgttgtgtaatgccctc
cacactctgagcaatgcaatagcaggagcagctatggcatctggtagtggtcccagttca
catggaatcggtatgcgtgatgcaatgagtcgaggtggtagcagcagctctgcccaaccg
gctggtcctagcggtatacctggtgacgacgggagagagtctgcttcttccccgctccca
acggcaccaatacctacacttagctggcccccagaaccgtcaggactgtatatggaccaa
gatgaggataaccttagcctcgggagcacttcggcaacggtaggcggatcttccagctcc
ctggctagcaacccaccctctctagcaaccagtatgtcttacacccaagctgtagccctg
accccagaggagcgtagaagcaatgcccatagcatcttacgtctgctctgtgaggcagct
gctcttactgaaaggctaccggacttcttgtctgccaaggactcccatggcaatacccct
ttcatgtcggctgtcaagatccgagcttattccgtagcgctgaccattttcgataccacc
gagaacctggcgtcccgtcgacgccccctcactcgaactcagcctggtagccagggtgga
ggcggtagccagaaaagggaagagcagccagccagtttcaacaaagagctgtttgaatca
atggtgttcccccctggtagtcacccggactcctcccctctctatgtgctctgccataat
gatacgtgtagcttcacatggacaggaacagaacatatcaatcaggacatctttgagtgt
aggacctgtggtctcctaggaccactctgctgctgtacagagtgtgccaggatctgccac
aaaggacatgactgcaaattgaagcgtacatcacctacggcatactgtgattgttgggag
aagtgtgaatgcaaagctctgattgcaggacagatcttcactcgtatggagcttcttgac
aggcttatcaatgaaaccaacttggttactataccaaacagcagaggggatcacattctg
ctgttcttggctcaaaccgtggcccgtcagacggtagaacagagacagtaccgccagtca
aggagtagactctctcgtaagaatgaatcagacattgacatgcctgatcataacttggag
ccaccccggttctgtcgtcatgcccttgagagcatcctacaggaatggcaagctgttagt
gctatgatactcaatggatgtcaagataagaagaaggattgtggaggagggtctggtcac
acccctataccggaggaccaggtgtatctaatgcgtcaatctggtactgtcaagttagac
tggttcacccatatgctcattgtcaagtgtacttcttcagatcttgataccctactgaca
actttgattcgccgtcttcgccatgctcaatctgccaccagtaaggccgaggcagcagag
gtagcccgtcggttcatccgatccgttgctagagtctttgttgttctcagtattgagatg
acccctggcaaaaagctgtctgagccagtgcagcgttgcaagcgagtgttccaggcattg
atccaccagtccatcacagagctgtgtgagataggagattcactgatagcacctgttagg
atgggggtagctagaccctcctcaccgttccctctcttcaacagccatgctgatgctatc
cagggaagtgaagaattgttttttacggagcccctcccaatgaggtctgcttctagcaac
cagtctagttcaagccacacccatcaccatgccccttctctgcggacacacccacaccgt
attacccgtaatcgtaccatcgatgaagacgatcaagacatggaggttggagaaggcgaa
gagattgacatggtcgaaggagatattgtggttgtatccagtgatgtacgtgagagggat
tccagcagtgccccgcccagagaccctagggaacaaccaagtcaagacgatcaacaagaa
gatgacgctggtaatgagagtgacatggacctagaccttctagcagagagtgactatgat
agtgagagtaaccatagcaaccaagatcaagaaagcagcgctcaggactccagccgtcga
ggtggcgtcaatgctcctaatgctggatccgatgctggcggtggtctagcatcactattc
ttttctgaagatgaatcatcgtccaatgctgatgaagccgaagaggaagaagaggaggac
agcgataatgaattcaatgagatagaagaagagaccgtcgatcaggcgttcaatgaagac
tcgctggagagaccgactacagctagtgcaagtggatctcaaaacattgaaggaaacaga
tctagccagccaccacaccctctccagtgggccttccgcaatcaacagcctctgtcatca
aacaactccaggactagtggctctggagtggtcaatgaggtgctaggatctgccagtacc
gctcctcctgttgtacccacaggtctcatttacatcgacccctccaacttgagacgaacg
accatctccacggcagcgaaccccactccacctaccaccaacacaactgagactgctcct
accaccacagcaagccgactagcgagggcgtttggcatcgtgctacgacaggtgtctgat
ctaatgacctccctaccaaactacaaggctcctgaacctctcacagaaacactagagatt
accgctgataatgccaaagagctgcagaattacgtgcagtgcagtctgaagcccacatgg
gactggctggtgtgtgtgatgaacagtacagaggctcagttacgatatggcaaggcattg
atgggagctactgatccttcacacccatcccatccaatgcgcagtcagtacatgcggact
ttgaggggagcagcccgcgatgcagcggccagggaagagacggcctaccagcactccttg
gagagcagaagacgaggaacccacaacaacacagaggaacacggctccatgatggactac
ttgacctatgtgctatcactcatgagatcgcataacagcgaacacttgggatcactcccg
atgttggacattgctgccatgaagcacatcgcttatgttctagactcctgcatctacttc
ttacgttgctttgagcgcgagccactctctgaaccctctcaggcatcctcaagcaagcgt
tcatggtgcttctcccaggacgttgatggaggcgaaaccagcgattccaacatggatgtt
gacggggcagaggaagatcggttggcaacgtctggtcgcaaacatccattctttgtccga
tcagattcaaccaccttcctaggttgcccaccacctgatccaatagagacccctctctca
gaagccctacctctggctgatagacctcacctactgcagccaagtgccaccaaagaacag
ctcttcggaatgcctcagaatccagtccttcctacagactctgaagtagctttaggccac
aaccaatcggtaacagtacaccaatctttcttggagatcctacccactcagatgagtgtg
tcccagcgtcaggtcttgggtcagccaggcatggatgatgaccaagaagaggaagaagat
gaagaagatgggatagaagaaaatgaggatggagctgctgctggaccgtccactctgcca
tccaatgggccaccagcccctcaggctcaaggtgaagaggagagaacagagacacaagaa
tcctcctcggtaacatcaggtgcagtttcagcagccacaggatcaacactacctgtaagc
cagagcttaggagaaagcagtgacctgtatcagccatcaggaccatcattttcatcaagc
agcttctctggtccatcgtcagattacagtcaatccagtgccgcatcggcaagtgctgca
tcagcagcaaagcccattttccaagatcagccgaggaacttgagtggagtgatccaaggt
tcttctgctcaagaaagtcctggaccgtcacatggaagtgaaagtgaaggtggtgactcg
gtgccaagtgctttagatgttgcaggaagcagtagcagccaggcatcctcagcaggacct
tctggtgttaacactgcaggaggtgcttctgcaacagttgtaagcgtgattcgtacaact
ggatcagtagataaatctgcaggagatcctcaagctcatagctcaggaagtagagaacca
ttggtcaatcagccagggcctgtaagggtatctgagatacctcttcctccagaccctgta
agggacagcagtgaagaatactctggtgctagtaggaatgttagtttgggtgccctcttc
catgttggaggagaagaatccgtgcaagctagtccaatgaacctatctgaatctgcccat
agtggacaggctgcagaaccttcggctttagagttgtctaatcatgagactggtgaacgg
agtcgtccgacatcggctacaagagaccttgatggagccgatcctgaagatggaggaaga
aggaaatcttcaggaagaggaggtccaacaacaatcactgttgacagagctgatatacaa
cctgttagcgacattgatcaagtcattagactcacaaggccgctgtctccactgctgtca
gcggatatgttacttggtagatggcgtctgtgtctagagctctttggccatgtcttcctc
gaggatgttggggctgagccagggtctgtccttagtgagctaggagggtttgaagtcaag
gaatctcgattcaggagggagatggagaaactccgcaacaaccacacatccaaggatctc
acgttagaggtggaacgctctcgtgacctgcttatacagcagaccatgcgccagctgaac
actcacttcaaccggaggagcagtagcaaccttgctggcctgccacttgctgtacaccgg
gtgaaggtgaccttcaaggatgaaccaggtgaaggcagtggggtagcaaggagcttctat
acagccattgcagaagctctgatgtctcaagaaagattacccaatctcgatgattgccag
ggttccaacaagggaccgcaatacagtctaatccagaggcttcgaagcagggagagggag
agggaacgtcagcgtcgctctgagctgcgaacaggcagcggacggatggcccagagtttg
gaccgtgataggaacaccctgtcctatgatgcaagaccattctaccctcgggatagtgct
aattctgatgaccgcagtgctgactatgagccgcttccaccatccaagcaggctctaggt
gaacggcttttcccgagggtgtatgctctacaaccatctttggccagtatgatcacaggt
atgctattggagctaccgccggctagactactgctgttacttgccagcgaggaatctctc
agggaacgggtggaggaagctgtggatatcatcctctctcgtggaagccgtgacgaccct
tcagacagcagccgtctagaccttgacatctttggtcttggagagagagagaagagcaag
aacgagagcagcggatcaacgtcttcagccatggcgatagagacggaggactgtgacgat
gcagatcgtgatggtgaggcattgttctttcagcccggcaagaggggattctactcccca
agaccgggcaagaacaccggggagagactcaatgtcttcagaaatgtcggcaggatattg
ggcttctgcttgcttcaaaacgagctgtgtcctttgaccctaaaccgacatgtcatcaag
tttctactaggaagaaagattggttggcatgacctggctttctttgactcaaccctatac
gagggtctacgccagctactcctggatgcagagcgaggtcacgctgcaagcattgctgca
atggagctgacattctccatccagctgagtaaggaggaaggaggtcagacggttgatctt
atcccaggagggagcagggttagcgtcaatacggacaacatcttcgagtatgtcaggcat
tacgcagagtacaagatggtaaccgtggcccacaagtgtctcacgtctatgaggcaagga
ctgtttgatgtcttgccacgtaattcaatggatggcctcaccgcagaggacttcaggtta
ctggtcaatggatgtggccaagtcaacgtccagatgttgatcagctacactacatttaat
gatgagacaggcaagctaggtgatggtcacagtaatgaaggtaatgacaagctgtcaacc
ttcaaattatggttctggagtattgtagaaaagatgacaactcaacaaaaacaagatttg
gtgtatttctggacctccagtcctagtctaccagctagcgcagaaggtttccagcccctc
cctaccatcacagtacgcccacccgatgataaccatctcccaaccgccaacacctgcatc
agccgtctgtacatcccactctacagctcaaaggctatcctcaagaagaagctgttactt
gctatcaagaccaaggcctttggtttcgtctag
DBGET
integrated database retrieval system
