Lytechinus variegatus (green sea urchin): 121421332
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Entry
121421332 CDS
T11173
Name
(RefSeq) transcription initiation factor TFIID subunit 11-like
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121421332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121421332
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121421332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
121421332
NCBI-ProteinID:
XP_041471950
LinkDB
All DBs
Position
9:complement(18400927..18415587)
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AA seq
374 aa
AA seq
DB search
MASRDDDYEWTKDDDDEEEEEEEIKPPAPPAKMEHYDDLYLSSSDLSSSDDDGEAIAATS
PGERQDSKDTEEQDEEDDEPPVKRSKTNDDDENLSISSSPPLSPASSVSVDGISQENTTS
PSTPKMQEQETLDDESGKEEEEDEKEREETPKDGLNEGKEEGEEETGGVQLPLFSGIGGS
LEDSISRPRLHEDVGSSRQPDAGEGVSGGSAEGEQGESGSLGRDTGDKEKDAPGGSKDPS
EETPAAPVDPVKEAYRKKARLDAEERQKMQILVSAFSEEQLNRYEMFRRSSFPKAAIKRF
MQSITGSSVSQNVVIAMSGIAKVYVGEIVEHALDVMEQWGDVPPLQPKHIREAVRRMSSE
GGTAHFKRTRALFS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgagatgacgactatgaatggacaaaggatgatgatgatgaggaggaggaa
gaagaagagataaagcctccagctccaccagccaagatggaacattatgatgacctctat
ctatcatctagtgacctgtcatcttcagatgatgatggtgaagcgattgctgcaacatcc
cctggagaacgacaagattctaaagatacagaggaacaagatgaagaggatgatgaacca
ccagtaaaacgttctaagaccaatgatgatgatgagaatctttctatctcatcctcccca
ccattgtctcctgctagtagtgtatcagtggatgggatctcacaggagaatactaccagc
ccttcaactccaaagatgcaagaacaggagacattggatgatgaaagtggaaaggaagaa
gaagaggatgaaaaggagagagaagaaacacccaaagatggattgaacgagggaaaagag
gaaggagaggaagagacagggggtgtacaattacccctctttagtggtatagggggtagt
ctagaggattccattagtagacctagacttcatgaggatgtagggtcatcacggcaacca
gatgctggtgaaggcgtgtcagggggtagtgctgaaggagagcaaggagaatcagggagc
ctcggtagagatacaggagacaaggagaaagatgctccaggaggctccaaggatccctca
gaagagactccagcggctccagttgatccagtcaaggaggcctaccgcaagaaagcaaga
cttgatgcagaagaaagacaaaaaatgcaaattcttgtctcggccttctcagaggaacaa
ctcaaccgttacgagatgttccgacgatcgtcgtttccgaaagctgccatcaaacgcttc
atgcagtccatcacaggaagctctgtgtcgcagaacgttgtgattgctatgtcaggtatt
gccaaggtgtatgtcggagagatcgttgaacatgctctggacgtcatggaacagtggggt
gatgtaccccctctacagcctaaacacatacgggaagctgtaaggagaatgtcaagtgag
ggcggcacagcacatttcaagaggactagagccttatttagttga
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