Lytechinus variegatus (green sea urchin): 121421474
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Entry
121421474 CDS
T11173
Name
(RefSeq) deleted in malignant brain tumors 1 protein-like isoform X1
KO
K13912
deleted in malignant brain tumors 1 protein
Organism
lvg Lytechinus variegatus (green sea urchin)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
121421474
NCBI-ProteinID:
XP_041472111
LinkDB
All DBs
Position
9:23765472..23813675
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AA seq
2557 aa
AA seq
DB search
MTMAVPLLGVLLMSFAVSAYATSPEAPCPVTGEWYVDWDASYECLSQLSQPFPGAIPGQI
LPLLTVTDVIQAAGASWTADNLIESEGEICVRIIPQLSAAAFGADIFREYCDPVLTSLRE
GTQLDAEGHCRMIFNITGYMSSFMGAAITPTPTTDTEYPMGIAALRPFDFEGIIRDIVAE
QFGITSDDVDSICSARQVIVDSGLPLRELVSNFLVAFVEALIPRAAEICNSWDAITSAIE
AASGPNDLPPEIFNDVSVLIAHLIGFENREALCQRLNISTSSPLLHYAASAIVGNMLSVL
TDSQHCSAIAQEAIDLSLAYTPTLDRDTLNLQIYQMTGINGTDQLCQVVEDAFQAEGSEG
DVRLADGPTELEGRVEIFVNGSWSPVCDIFFNEEEAEVVCRQLGFDAAVASRCCSQYGFT
DVPGVLGRFSCTGTEDNLLACPQNEPVDTYDHCYSWAHAGVVCRGELTPCPLPSGPAIDW
EAIYQCEVPYFQEFIQSYNRYPPVPGEVMPFLTVANMIDAAGAIWGSDDLFEGLGNFCTL
IAPRATVSAGPDVFPGICDPLIPLADGVDLDGSVGEEICRYIYSMSRPGPYPEPFSTDAP
IGTTTVPPPPNTRSSSTPAVWPTDFPSFIESITPIICIFPLSSYDITSEVLDFGIDALRG
FDPVPILLQAVDNVLNITEYDQDSLCSGVNHLTDVDNRPSDLAIEFMTEVLAALLPIGSE
ICQEWDSFIEALVAESGSYVEVDLGILVEEISGVVALLTDFPDRDSLCTYIQTATSLPGE
HANTFARFLVLNALNLLHDEEKCVSVLDSALAVTDAIPGVSREEVENIYMPMYSGFTDIV
EMCRYISKAFGPRTPRLPIRLADGSTPDEGRVEVQYNGTWGTVCDDDFDDDDAIVVCRQL
GYRGEAISLGNLIPGSGDIIYDDLRCLGVESFLGQCPNAGLTVNNCAHYEDISVSCSIEV
TPPILPTTQAWTTEGITDLPTRLVNGDTDNQGRLEVFYQGQWGTVCDDFWDSDATDVACR
ALGFLRGANYSCCAAFGQGDGPIIIDDVMCNGDESSIASCRHGRPFNHNCQHSEDVAIAC
IPDDSATGGVRLVGGNHPAEGRVEIEYEGEWGTICDDSWGLEDASVVCRMLGYPAATDAP
GYAHFGQGSGPILLDDLACTGDEESIFDCGNPGIGVNNCGHYEDAGVVCSSEVVRLVGGS
SDAEGRVEIQHDGVWGTICDDGWGLEDAGVICRMLGFEGAIGAPGSAEFGIGSGPIQLDD
VGCSGNEETIFDCYHRPIGEHNCAHNEDAGVVCIPRDTEVVRLVNGNNEAEGRVEINVNG
EWGTICDDGWDLDNANVICRMLDFEGALSAPGSAQFGQGSGPIQLDDVSCSGNEDTILDC
SHRPIGEHNCGHSEDAGVVCIPQEVVRLVNGNNEAEGRVEINVNGEWGTICDDLWSLQDA
NVICRMLGFGEALSAPGSAQFGQGSGPIQLDDVTCSGNEENILDCSHRGIGQHNCGHSED
AGVVCTQQEVVRLVNGNNDAEGRVEINVNGEWGTICDDGWDLDNANVICRMLDFEGALSA
PGSAQFGQGSGPIQLDDVSCSGNEETILDCSHRPIGEHNCGHSEDAGVVCIPQEVVRLVN
GNNEAEGRVEINVNGEWGTICDDLWSLQDANVICRMLGFGEALSAPGSAQFGQGSGPIQL
DDVTCSGNEENILDCSHRGIGQHNCGHSEDAGVVCTQQEVVRLVNGNNDAEGRVEINVNG
EWGTICDDGWDLDNANIICRMLDFEGALSAPGSAQFGQGSGPIQLDDVSCSGNEDTILDC
SHRPIGEHNCGHSEDAGVVCIPQEVVRLVNGNNEAEGRVEINVNGEWGTICDDLWSLQDA
NVICRMLGFGEALSAPGSAQFGQGSGPIQLDDVTCSGNEENILDCSHRGIGQHNCGHSED
AGVVCTQQEVVRLVNGNNDAEGRVEINVNGEWGTICDDGWDLDNANVICRMLDFEGALSA
PGSAQFGQGSGPIQLDDVSCSGNEDTILDCSHRPIGEHNCGHSEDAGVVCIPQEVVRLVN
GNNEAEGRVEINVNGEWGTICDDLWSLQDANVICRMLGFGEALSAPGSAQFGQGSGPIQL
DDVTCSGNEENILDCSHRGIGQHNCGHSEDAGVVCTQQEVVRLVNGNNEAEGRVEINVNG
EWGTICDDGWDLDNANVICRMLDFEGALSAPGSAQFGQGSGPIQLDDVSCSGNEETILDC
SHRPIGEHNCGHSEDAGVVCIPQEVVRLVNGNNEAEGRVEINVNGEWGTICDDLWSLQDA
NVICRMLGFGEALSAPGSAQFGQGSGPIQLDDVICSGNEETILDCSHRGIGQHNCGHSED
AGVVCTQQEVVRLVNGNHDAEGRVEINVNGEWGTICDDLWSLQDANVICRMLGFGEALSA
PGSAQFGQGSGPIQLDDVICSGNEETILDCSHRGIGQHNCGHSEDAGVVCTQQGVRLVNG
NNANEGRVEVYHDGQWGTVCDDGWDLAAARVVCRMLGFPGASSAPIYAHFGQGSGDIFLD
DIVCAGDETTIWACSHSSVGVHNCSHREDAGVVCTTT
NT seq
7674 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggcggtccctcttttgggtgttctcttgatgagttttgccgtttcagcgtat
gccacttcacctgaagctccatgtccggtaacgggagaatggtatgtggactgggacgcc
tcctacgagtgtctctcacagctttctcagccattccctggtgctattcccggtcagatc
ctgcctctgttgaccgtaaccgatgtcatacaagcagcaggagcgtcctggaccgccgac
aacctcattgaatcagaaggggaaatatgtgttaggatcattccccagctctcagcagct
gcgtttggagctgatatcttcagagagtactgcgatcctgtcctgacgtctttgagagag
gggacgcagcttgatgcagaagggcactgcaggatgatattcaacataacagggtacatg
tcctcattcatgggggctgccattactcctacgccaactactgataccgaataccctatg
ggaatcgccgcattacgacctttcgactttgagggcatcataagggacattgttgccgag
caattcgggatcaccagtgacgacgtggactcaatctgtagtgctcgacaggttatagtg
gattctgggttgcctttgcgtgaacttgtctcaaatttccttgtggcatttgttgaagct
ctcatacccagagctgcagagatctgtaatagctgggatgccatcacttcggctattgag
gctgcgtcgggtccgaacgatttaccacccgagatattcaacgacgtgtccgtcctaata
gcacatttaataggcttcgaaaacagagaggctttgtgccaacgtttaaacatatccact
tccagcccactgcttcattatgcagcttcagctattgtaggtaatatgctctccgtgttg
accgattctcaacattgttctgccatcgctcaggaggctatagatctttctttggcgtac
acccctaccctagatagagacacgcttaaccttcaaatctatcagatgacagggattaat
ggcaccgaccagctgtgtcaggttgtcgaagacgcattccaggcagaaggaagtgaaggg
gacgtacgcctggctgatgggcctacagaactagaaggacgtgttgagatctttgtgaat
ggctcttggtctccagtgtgtgacatttttttcaacgaagaagaggccgaagttgtttgc
cgacagctaggatttgacgcagcagttgcatcgagatgttgttcgcagtatggattcacc
gacgtaccgggcgtccttggccgatttagctgcaccgggacggaggacaaccttcttgca
tgtccccaaaatgaaccagtcgacacctacgatcactgttattcatgggcacacgctgga
gtcgtgtgtagaggagaacttacgccttgccctctcccaagtggaccggcaattgattgg
gaagcgatataccaatgtgaagtcccttacttccaagagttcatacagtcatacaacaga
taccctcctgttcccggggaggtcatgccattcctcactgtagcaaacatgatcgacgct
gcaggagccatttggggatctgacgacttgttcgaagggttgggcaacttctgcacactc
attgctccacgagcgacagtgtcagctggtcctgacgtattccctggcatatgcgaccct
ctgataccgttggcggacggcgttgacttggatgggtccgttggtgaagagatatgtaga
tacatctactccatgtcaagacctggaccttaccctgaacctttctctaccgacgctccc
attggtacgactaccgtaccacctccaccaaacacgagaagtagctcaacacccgcagtg
tggcccacggatttcccctcgttcattgaatcaataaccccgatcatctgcatattccct
ctttcgtcctatgatattacttccgaagttcttgactttggcattgacgcccttcgagga
ttcgacccggtacctatcttattgcaagctgtcgataatgtgctgaacatcacggaatat
gaccaggacagtttgtgctctggagtgaatcacctgactgatgttgacaaccggccaagt
gatcttgcgatagagttcatgacggaagtcctggcagccctcttgccaataggtagtgaa
atttgccaggagtgggacagctttatcgaagccctggtagccgagtctggtagttacgtc
gaagtcgatctcggaatcctggtggaagagatatctggagtcgttgcgctgctaaccgac
ttccccgacagggattcattgtgtacgtacatccagactgctacttccttgccgggagaa
catgcaaacacctttgcaagatttcttgtgttaaacgccctgaatttgctgcatgatgaa
gaaaaatgcgtctctgtacttgacagcgccctggcagtcactgacgctataccaggagtt
tctcgggaggaggtggaaaatatatacatgccaatgtacagtggttttactgatatcgtt
gagatgtgtcggtacataagtaaagctttcggtccaagaacgcctcggcttcctatccgg
ctcgctgacggtagcactccggatgaaggacgcgttgaagttcaatacaacggtacgtgg
gggaccgtctgcgacgatgacttcgacgacgatgacgccatcgttgtgtgtcggcaactt
gggtaccgaggggaagccatttcccttggaaacttgattcctggcagtggtgatatcatt
tatgacgatctgagatgcctgggggtcgagtctttcctcgggcaatgcccaaatgctggt
ttgacagtcaataattgcgctcactatgaggatatcagcgtgagctgtagtattgaagtg
acaccaccaattctaccaacaacgcaggcttggacaacggaaggtattactgatctaccg
acacgactggtcaatggcgacactgacaaccagggacgtctcgaggttttctaccaaggc
cagtggggcacggtttgcgatgatttctgggattcagatgctaccgatgttgcctgccgt
gccctcggcttcctccgtggggcgaactattcttgttgtgccgcgttcggccaaggtgac
ggtcccattatcatagatgacgtcatgtgtaacggagacgaaagtagcatcgcgtcgtgt
cgccacggaagaccgtttaaccataactgccagcactctgaggacgtcgcaattgcctgt
atcccggatgattcggcaacaggaggcgtacgtcttgttggaggaaatcacccagcagag
ggaagagttgaaattgaatatgaaggcgagtggggaactatttgcgacgactcatggggt
ttggaagatgccagtgttgtgtgcagaatgttgggctatcctgcagctactgatgctcca
ggatatgctcacttcggccaaggttccggtcctattcttcttgatgacttggcttgtact
ggggatgaggagagtatcttcgactgtggtaatccgggcatcggtgtaaacaattgtggc
cattacgaggatgcaggagttgtttgcagcagcgaagttgtacgtctagttggtggaagc
agcgatgcagaaggtagggttgaaatccaacatgacggagtctggggaactatctgtgat
gacggatggggtctggaggatgctggtgtgatctgcagaatgctcggtttcgaaggtgct
atcggagcacccggatcagctgagtttggcataggctctggtcctattcaactcgatgat
gtcggctgttcaggaaatgaggaaaccatctttgactgctatcatcgcccgattggtgaa
cacaattgtgcccacaacgaagacgctggggttgtctgcattccccgagacacagaagtg
gtacgtctagtcaacggaaacaacgaagctgaaggaagagtcgagatcaacgttaacgga
gaatggggaactatctgtgatgacggatgggatctggacaatgctaatgttatctgtaga
atgctcgatttcgagggagctctcagcgccccaggatcagctcaattcgggcaaggctcc
ggtcctatccaactcgatgacgtcagctgttcaggaaatgaagatacaatcttggactgt
tctcatcgtccaattggtgaacacaactgtggtcacagcgaagacgctggggtagtgtgc
attcctcaagaagtggtacgactggttaatggaaacaacgaagctgaaggaagagtcgag
atcaacgttaacggagaatggggaacgatctgcgatgatctctggagtttacaggatgct
aatgttatctgtagaatgctaggtttcggggaagctctcagcgctcccggatcagctcaa
ttcggccaaggctctggtccgatccaactcgatgatgttacctgttcaggaaatgaagag
aacatcttggactgttctcacagaggcattggtcaacacaattgtggtcacagcgaagac
gctggagttgtgtgcactcaacaagaagtagtacgcctggttaatggaaacaacgacgct
gaaggaagagtcgagatcaacgttaacggagaatgggggactatctgcgatgacggatgg
gatctggacaatgctaatgttatctgtagaatgctcgatttcgagggagctctcagcgcc
ccaggatcagctcaattcggccaaggctctggtcctatccaactcgatgacgtcagctgc
tcaggaaatgaagagacaatcttggactgttctcatcgtccaattggtgaacacaactgt
ggtcacagcgaagacgctggggtagtgtgcattcctcaagaagttgtaagactggttaat
ggaaacaacgaagctgaaggaagagtcgagatcaacgttaacggagaatggggaacgatc
tgcgatgatctctggagtttacaggatgctaatgttatctgtagaatgctaggtttcggg
gaagctctcagcgctcccggatcagctcaattcggccaaggctctggtccgatccaactc
gatgatgttacctgttcaggaaatgaagagaacatcttggactgttctcacagaggcatt
ggtcaacacaattgtggtcacagcgaagacgctggagttgtgtgcactcaacaagaagta
gtacgcctggttaatggaaacaacgacgctgaaggaagagtcgagatcaacgttaacgga
gaatggggaactatctgcgatgacggatgggatctggacaatgctaatattatctgtaga
atgctcgatttcgagggagctctcagcgccccaggatcagctcaattcggccaaggctct
ggtcctatccaactcgatgacgtcagctgttcaggaaatgaagatacaatcttggactgt
tctcatcgtccaattggtgaacacaactgtggtcacagcgaagacgctggggtagtgtgc
attcctcaagaagtggtacgactggttaatggaaacaacgaagctgaaggaagagtcgag
atcaacgttaacggagaatggggaacgatctgcgatgatctctggagtttacaggatgct
aatgttatctgtagaatgctaggtttcggggaagctctcagcgctcccggatcagctcaa
ttcggccaaggctctggtccgatccaactcgatgatgttacctgttcaggaaatgaagag
aacatcttggactgttctcaccgaggcattggtcaacacaattgtggtcacagcgaagac
gctggagttgtgtgcactcaacaagaagtagtacgcctggttaatggaaacaacgacgct
gaaggaagagtcgagatcaacgttaacggagaatggggaactatctgcgatgacggatgg
gatctggacaatgctaatgttatctgtagaatgctcgatttcgagggagctctcagcgcc
ccaggatcagctcaattcggccaaggctctggtcctatccaactcgatgacgtcagctgt
tcaggaaatgaagatacaatcttggactgttctcatcgtccaattggtgaacacaactgt
ggtcacagcgaagacgctggggtagtgtgcattcctcaagaagtggtacgactggttaat
ggaaacaacgaagctgaaggaagagtcgagatcaacgttaacggagaatggggaacgatc
tgcgatgatctctggagtttacaggatgctaatgttatctgtagaatgctaggtttcggg
gaagctctcagcgctcccggatcagctcaattcggccaaggctctggtccgatccaactc
gatgatgttacctgttcaggaaatgaagagaacatcttggactgttctcacagaggcatt
ggtcaacacaattgtggtcacagcgaagacgctggagttgtgtgcactcaacaagaagta
gtacgcctggttaatggaaacaacgaagctgaaggaagagtcgagatcaacgttaacgga
gaatggggaactatctgcgatgacggatgggatctggacaatgctaatgttatctgtaga
atgctcgatttcgagggagctctcagcgccccaggatcagctcaattcggccaaggctct
ggtcctatccaactcgatgacgtcagctgttcaggaaatgaagagacaatcttggactgt
tctcatcgtccgattggtgaacacaattgtggtcacagcgaagacgctggggtagtgtgc
attcctcaagaagtggtacgactggttaatggaaacaacgaagctgaaggaagagtcgag
atcaacgttaacggagaatggggaacgatctgcgatgatctctggagtttacaggatgct
aatgttatctgtagaatgctaggtttcggggaagctctcagcgctccaggatcagctcaa
ttcggccagggctctggtcctatccaactcgatgacgttatctgttcaggaaatgaagaa
accatcctggactgttctcaccgaggcattggtcaacacaattgtggtcacagcgaagac
gctggagttgtgtgcactcaacaagaagtagtacgcctggttaatggaaaccacgacgct
gaaggaagagtcgagatcaacgttaacggagaatggggaacgatctgcgatgatctctgg
agtttacaggatgctaatgttatctgtagaatgctaggtttcggggaagctctcagcgct
ccaggatcagctcagttcggccagggctctggtcctatccaactcgatgacgttatctgt
tcaggaaatgaagaaaccatcctggactgttctcaccgaggcattggtcaacacaattgt
ggtcacagcgaagacgctggagttgtgtgcactcaacaaggtgtacgactggttaatggg
aacaacgcgaatgaaggaagggtcgaggtctaccatgacggacagtggggtactgtctgt
gacgatggatgggatctggccgctgctcgcgtggtctgtcgaatgcttggtttcccgggt
gcgtctagtgcccctatatatgctcattttggtcagggcagcggcgatatcttcctggac
gatatcgtctgtgcaggagatgaaacaaccatctgggcctgcagtcattcaagcgttggt
gttcacaactgtagccatcgcgaagatgctggagtcgtctgtactaccacctag
DBGET
integrated database retrieval system
