Lytechinus variegatus (green sea urchin): 121421588
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Entry
121421588 CDS
T11173
Name
(RefSeq) vesicle-associated membrane protein 5-like
KO
K08512
vesicle-associated membrane protein 8
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04130
SNARE interactions in vesicular transport
lvg04140
Autophagy - animal
lvg04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121421588
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121421588
04140 Autophagy - animal
121421588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121421588
Membrane trafficking [BR:
lvg04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
121421588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Sec62
MacP_activator
PLU-1
DUF2207_C
GlpR
CelTOS
Orf78
Neur_chan_memb
DUF6442
DUF4407
DDB_G0292058_C
Fzo_mitofusin
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
121421588
NCBI-ProteinID:
XP_041472275
LinkDB
All DBs
Position
9:complement(26774572..26789413)
Genome browser
AA seq
120 aa
AA seq
DB search
MSAELKKDKKDNDNRKKNKKKKGKKRNDGNIDDLQQDVDQVAEIMVTNIDKLLERGDKLE
DLMENAEDLEAQAKGFQVVTKKVKENEKWKYRKTKICLALIIFFILIAVVAIILLIVKPW
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgagctgaagaaggacaaaaaagacaatgataataggaagaagaataagaag
aagaaaggcaagaagaggaacgatggtaacatagacgaccttcagcaagacgtcgatcag
gttgcggagatcatggtgactaatattgacaagctactggagaggggagataagctagaa
gatttgatggagaatgctgaggatctagaagctcaggcaaaaggcttccaagttgtcaca
aagaaagtgaaagaaaatgagaaatggaaatacagaaaaacaaagatctgcttggcgctg
ataatcttcttcattttgatagccgttgtagcgattatcctattgatagtaaagccatgg
tag
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