Lytechinus variegatus (green sea urchin): 121421599
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Entry
121421599 CDS
T11173
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03420
Nucleotide excision repair
lvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121421599
09124 Replication and repair
03420 Nucleotide excision repair
121421599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121421599
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121421599
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
121421599
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121421599
TCR (transcription coupled repair) factors
Cul4-CSA complex
121421599
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
121421599
NCBI-ProteinID:
XP_041472287
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All DBs
Position
9:26939168..26977652
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AA seq
1143 aa
AA seq
DB search
MAYNYVVTAHKPTAVNGCVTGNFTSADDLNLIIAKNTRLEIYVVTPEGLRPIKEIGMYGR
IEVLKLYKPPGQPKALLFVLTAKYNACILECVTENGTEEIITKAQGNVQDRIGRPSETGP
IGIIDPECRMIGLRLYDGLFKIIPLDRDNKELKAFNIRLEELNVIDVQFLYGCHQPTIVF
LHQDPHGRHVKTYEVNLREKEFNRGPWKQDNVETEATMVIAVPQPYGGALIIGQESITYH
KGDNYVAIAPPTIKTSTLVCYGRLDNNGSRYLLGDLTGRLFLLLLDKEESMDGPTTVKDL
KLEFLGETSIAECLTYLDNGVVFIGSRLGDSQLVRLNTESDDNGSYVTMMETFTNLGPIV
DMAVVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLKVDMNSQ
FDDTLVLSFVGQTRVLMLNGEEVEETELPGFDGDRQSFYCGNVAHNQIIQITGASVRLVS
TPTKRMVSEWQPQSGKNISVASCNSRQVVCAAGSDIYYLEIFEGEVRQVSTLTMEHEVAC
LDITPLTGDFTDLCAVGLWTDISARILKLPTMESMHVELLGGEIIPRSILLTTFEGQNYI
LCALGDGSLFYFQLNAETGYMTDRKKVILGTQPTVLKTFKSHSTVNVFACSDRPTVIYSS
NHKLVFSNVNLKEVSYMCPLNSDGYPDSLALCNDTTLMIGSIDEIQKLHIRTVPLGETPL
RITYQESSQTFGVISTRTDVVDSSGTTASMGQTRQSASTSALNITKSGGNKGMAGQAGGS
GEGSSFGDEVEVHSLLIIDQHTFEVLHAHHFGASEYATSLISCKLCNDSNWYYIVGLANV
HPDEAEPKSGRIVVFQYIDGKKKFFLTKEIKGAPYSLVEFNGKLLASVNSVVRLFEWTPE
HSLRVECSHYNNVLALYLKTKGDFIVVGDLMRSITLLAYKPMEGCLEEIARDYSPNWMSA
VEILDDDTFLGAENSSNLFTCQKDSAATTDEERRHLQEVGLFHLGEFVNVFRHGSLVMQN
IGESTIPTTGSVLFGTVSGSVGLVTQINEEFYRFLLEVQNKLTKVIKSVGKIKHSFWRSF
YSERKTEPMDNFIDGDLLESYLDLSKDTMDEVALGLQIDDGGMKRDCTSNDLIKIIEELT
RIH
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaactatgttgttactgcgcacaaaccaacagctgttaatggatgtgttaca
ggtaatttcacatccgctgatgacctcaacttgatcattgccaagaacactcggctggag
atctacgttgtaacaccagagggattgaggccaatcaaagaaataggaatgtatggacgc
atcgaggtcctcaaactttacaagcctccaggacagcctaaggccttgttatttgtgttg
acagccaagtacaatgcctgtatcttagagtgtgtgacagagaacggaacggaagaaatc
atcacaaaagcacaaggaaatgtccaggatcggattggtcggccttcagaaactggaccg
ataggaatcattgatccagaatgccgtatgattggattaagactctacgacggtctcttc
aagatcatcccacttgacagggataacaaggaactcaaggctttcaacatcagacttgaa
gaactgaatgtgattgatgttcagtttctctatggatgtcaccaaccgaccattgtcttc
ttacatcaggatcctcacggaagacatgtcaagacctacgaggtcaacttgagagagaag
gagttcaacagagggccgtggaagcaggacaatgtagagactgaagcaaccatggtcatt
gctgtgccgcagccttatgggggcgccctgatcatcggacaagaatccatcacctaccac
aaaggggataactatgtagccatcgctccaccaaccataaagactagcacactggtctgc
tatggtcgtttggacaacaacggttctcgatatctgcttggtgacttgaccggtcgtctg
ttcttgctactactcgacaaggaggagagtatggatgggccaactactgttaaggatctc
aaactggagttcttaggagagacttcgatagctgaatgtcttacgtaccttgataatgga
gtggtctttatcggatctcgtctcggggactcacagctggtcaggttgaatacagagtcg
gatgacaatggatcatatgtgacaatgatggagacgttcaccaatcttggaccgatcgta
gacatggctgtagtggacctggataggcaaggacaaggacagttggtaacctgttcagga
gcctacaaagagggctcccttcgcataataagaaacggcatcggaatccatgaacatgcc
agtattgacctaccgggcatcaaaggtatctggccattgaaagtggatatgaactcccaa
tttgatgatactttggtgctttcttttgttggtcaaacaagggttctgatgttgaatggt
gaagaagtagaagaaacagaattacctggttttgacggtgatcggcagtcgttctactgt
ggcaatgtagcacacaatcaaattattcagatcaccggtgcttctgtgcgtttggtcagt
acacccaccaaacgaatggtgagcgaatggcaacctcaatcagggaagaacatcagtgtt
gcatcgtgtaatagcagacaagtagtctgtgctgcaggctcggatatatattaccttgag
atctttgagggagaagtgcgacaagtcagcactctaactatggagcatgaggttgcttgc
ctggacatcacaccactgaccggtgacttcacagacctctgtgctgtaggtctgtggaca
gacatctcggcgaggatactcaaactacccaccatggaatcaatgcatgttgagctacta
gggggagaaatcatccctcgatctatcttattaacaacctttgagggtcagaactacatc
ctctgtgctctaggtgatgggtcactattctacttccagctcaacgctgaaacaggttac
atgacagatagaaagaaggtaatccttgggacacagccgacagtcttgaagacgttcaag
tctcactcaacggtcaacgtgtttgcctgctctgacagaccaacggtcatctattccagc
aatcataaactcgtcttctccaatgtcaatctgaaggaggtcagctatatgtgtcctctg
aattctgatggatacccagacagcttagctctttgtaacgacacaaccctgatgatcggt
agcatcgacgagatccagaaacttcacatccgtaccgtccctcttggcgagacaccacta
cgcatcacgtatcaagagtcctcgcagacgttcggtgtcatctcgaccaggaccgatgtc
gtcgattcctcggggacgacggcatccatgggacagacccgacagagcgcgagcaccagt
gctctgaacatcacgaagagcggaggtaacaaggggatggcagggcaagctggaggcagc
ggggaagggtcatcattcggagatgaagttgaagtccactcactgctcatcattgaccaa
cacacatttgaagtactccatgctcatcactttggtgcatcagaatacgcaacgagtctg
atctcctgcaagctttgtaatgattctaactggtattacatcgttggtcttgctaatgtt
catcctgatgaagcagagccgaagagtggaaggatagtagtctttcaatatattgatggt
aaaaaaaaattctttctgactaaggagataaaaggtgccccatactcactggtagagttc
aatggcaaactcttagcatcagtcaatagtgtggttcgtctgtttgagtggaccccagag
cattcgttacgcgtagaatgcagtcattacaacaacgtattagccttgtacctgaagaca
aaaggagacttcatagtcgttggggatttgatgcggtcaattacgttactggcatacaag
ccaatggaaggatgcttggaagagattgctagagactacagtcctaactggatgtcggcc
gtagagatcttagatgacgataccttcttaggagctgaaaactcatcaaacctcttcact
tgccagaaagacagtgcggcaacaacagatgaagaaagaaggcacttacaggaggtgggt
ctattccatttgggagagtttgtcaacgtgttccgccatggatctctagtaatgcagaac
attggagagagcacaatacccacaaccggcagtgtgctttttggtaccgtcagtggatca
gtaggtctggtcacccagatcaacgaggagttctatcgatttcttcttgaagtccagaac
aagctaaccaaggtcatcaagagtgtaggaaagatcaaacatagcttctggagatcattc
tattctgagaggaagacggagccgatggataacttcatcgatggtgaccttctagagagc
tacctagacctcagcaaggatacaatggatgaagtagccctcggactacagattgatgac
ggaggaatgaagagagactgcacatctaacgatctcatcaagattattgaagaactaacg
aggattcactga
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integrated database retrieval system
