Lytechinus variegatus (green sea urchin): 121421722
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Entry
121421722 CDS
T11173
Name
(RefSeq) protein cycle-like
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
121421722
Transcription factors [BR:
lvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121421722
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_NCOA
bHLH_INO2
PAS_2
bHLH_HIF1A
HAUS-augmin3
DUF678
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121421722
NCBI-ProteinID:
XP_041472438
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All DBs
Position
9:8408656..8458568
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AA seq
648 aa
AA seq
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MMQNMSISDMSSTMDRKRKLSFIDSGGEDMSDEDLSSERNTSGDDSKKLSKQNHSEIEKR
RREKMNTYIQELSAMVPTCSSMSSKLDKLTILRMAVQHMKTLRGASSSRKEANYKPSFLS
EDDLNPLILEAAEGFLFVVSCDRGRVLYVSESVLNVLNITWERLIGQSLFDILHPKDVPK
VKEQLSSSDLSPRERFIDTKTGMLVKSEMTMSPPQLSSGARRSFFCRMRIYSPEHAVKTE
DGQQWKRLKQPADRKKYATIHCTGYLKSWPPAKVGLDKDEMEVDIDGCNLSCLVAVARVQ
TIQSPIPSPNNNIQLKPIEFVSRHAMDGKYTFVDQRATAVMGYLPQELLGTSCYEYYHID
DISIMAEYHKTVLSSREKILTSSYRFRAKNGEFILLRSRMFTFRNPWTKEIEYVVSTNTL
VNKDEAIPSNSNECGPTTKDQESSQLQSLITNLSKSAAIPGVSTNNTHMGAGKIGWKIAE
EVMEAERMNEVSSSGWESKDASPVVVDSQGITGDAVSSMGSETNKVSSREVRKSSGNIPG
DPKPEKMPTTVKTGQSFLNNSSVVCGDQTNNSGNLPQNPFAEVSSAAGLSTAALAAELST
PGAAAAAAAKVKEMGGDDEAAMAFIMSLLEADAGLGGSVDFNDLPWPL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacatgagtatctcggatatgtcaagtactatggataggaaaaggaaactg
agttttattgattctggaggggaggatatgagtgatgaagatctatcaagtgaaagaaat
acatcaggagacgacagcaaaaagctctcaaaacagaatcacagtgagatcgagaaaagg
agacgagagaagatgaacacgtacatacaagaactgagcgctatggtccccacctgcagc
tccatgtcgtccaagttggataaacttaccatactacgcatggctgtacagcatatgaag
actttaagaggtgcttcaagttctcgtaaagaagcaaattataagccgtcttttctctca
gaagatgacctcaatcctctcattctagaggctgccgaaggatttctttttgtcgtgagc
tgtgaccgtggccgggttctctacgtgtcggaatcggtgctcaacgtcctcaatattacc
tgggaacgtttgattggtcagagtttatttgatatcctccatcccaaagacgtccccaag
gtcaaagagcaactctcatcatccgacctttcaccccgagaacgtttcatcgacaccaag
actggtatgttggtaaaatcagagatgacgatgtcgccgcctcagttatcatcaggagct
cgacggtcgttcttttgtaggatgaggatatacagccccgagcatgcggtcaagactgaa
gatggtcaacagtggaagcgactgaaacaaccagcagatcgcaagaagtatgcaacgata
cactgtacaggttacttgaagagttggccaccagcgaaggtcgggttggacaaagacgag
atggaagtcgacatcgatggttgcaatcttagctgtcttgtcgctgtagccagagtacag
actatccagagcccaatcccatcccccaacaataacattcaactcaaacctattgaattt
gtatccaggcatgcgatggatggtaaatacacattcgtagatcaaagagctactgccgta
atgggctaccttcctcaggagttgttaggtacttcatgttacgagtattatcacatagac
gatatatctataatggcagagtatcataaaacagtactgtcgagtcgagagaagatctta
acaagttcttatcgcttcagagcaaagaatggcgagtttattcttctacgatcacgaatg
ttcaccttccggaatccttggacgaaggaaatagaatacgtggtctctaccaatacatta
gttaacaaagatgaggccatcccatctaacagcaatgaatgtggtccaacaaccaaagat
caggaatcatctcagctccaatccctgatcaccaacctgagtaagtcagcggctataccg
ggtgtgtccaccaacaacactcacatgggagcagggaagataggctggaagatcgcagaa
gaggtcatggaagcagaaagaatgaatgaagtttcatcgagtggctgggagtctaaggat
gctagtcctgttgtggtcgattcccaaggcatcactggagatgctgtatcatccatgggt
tctgaaaccaacaaggtgtcgtccagggaggtccggaaaagcagcggcaacatccctggt
gaccctaaaccagagaagatgcccaccacggtcaagactggtcagtccttcctcaacaat
agttcagtagtatgcggtgaccagacaaacaactctgggaacctaccgcagaatcccttt
gcggaggtgtcctcggccgcaggattgtcaacggcagctcttgctgcggaactcagtaca
cccggtgctgctgcagccgcagcggcaaaggtgaaggagatgggtggggacgatgaagct
gccatggcgtttattatgagcttactagaggctgatgccggtttgggtgggtcggtagac
tttaacgatcttccgtggcctctatga
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