Lytechinus variegatus (green sea urchin): 121422041
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Entry
121422041 CDS
T11173
Name
(RefSeq) ATP-dependent DNA helicase Q1-like isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121422041
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121422041
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121422041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SKA2
NCH1
Cas3-like_C_2
DUF3847
Motif
Other DBs
NCBI-GeneID:
121422041
NCBI-ProteinID:
XP_041472780
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All DBs
Position
9:33802284..33813203
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AA seq
950 aa
AA seq
DB search
MEAGSLDIQHGLEEVNQELQHVEKQIERLLQKQQRLLQRKEQLEVQSSRLHELSLQAGST
DWEKSDYPWSAKLHSLRETVFGIKKFRPLQEKTMNASLSGRDVILLMPTGGGKSLCYQLT
ALVSKGFTLVVSPLVSLMEDQTMALEELGVNATVLNSNTPPELVKDVHRQMIDARSELKL
LYVTPEKIAKSKRFMACLEKAYKAKLLTRIAIDEVHCCSQWGHDFRPDYKILGLLKRQFT
ETPILGLTATATMDVLDDVKGILGLQGCQVFRAGFNRPNLFYEVRPKPSKHADFVEELIR
LINGEFKGQSGIIYCFSRKDAETMAESLKDGGIQAHPYHAMLDAHYRSQVHKNWKENNIQ
VVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDEPAKCIAYYGLADVFRQ
STMVVTEQTGQQKLYNMVAYCVAPATCRRTLIGQHFGERWEGQARCNKMCDVCRSGAKVV
EKDMLPHLQRIYTILDHKSKGDNRVTALKLTEELMSKKGVAALDKDQAKKMTGLDYGYLI
AHFLLEGYLREDFHFTPYNTISYIIPGPKARVLATKPQRSITVPFKLEDGHMSKVKVHSG
KGQKEKGSRGDAPATKTREDERKKGRDESGRGSEVRKTEGEGHRGKTKKRKLVEEASIID
LCSDDSDDEDFTERKPTKKSGKSAKLSTTMEGTCNVRDSVGSKGASTAQKCRGGTDEKVQ
SAAAQKSSSGTTVLDRTDAGSSKNSSNVTEHSGQSQPAKHAPSKDNNSESGPFTFKSITS
TQSLASSHSKGAHSANQGPGKESQDLARASKPNQPGSSTSEPSSKSNSRSNFPDSQRSPP
AAVHRRAPSMGLSPGSDVEMDLRSVYTQQLMNLGSEGESFNRENSSFTMSTSFSGSEDGL
GNTPASRRRKGTMRRVDSMDTCDEDDSMRDDYETLKKVYSDQMKRLDDPI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgggagtttggatatccagcatggactagaggaggtgaaccaggagctccag
catgtggagaagcagattgaaaggctcctgcagaaacaacaacggctcctgcagaggaag
gagcagctggaggtccagtccagtcggcttcatgagctgagcctccaggcgggctccact
gactgggaaaaatcagactacccatggtcagctaagctccacagcttgcgagagaccgtc
ttcggcatcaagaagttccgcccgctccaggagaagacgatgaatgcctctttgagtggc
agggatgttatcctccttatgcctaccggtggagggaagagcttgtgctatcaactcaca
gctctggtcagcaagggattcacacttgtagtttctccattggtgtccttgatggaagac
caaaccatggcgctggaagagcttggtgtgaacgccacagtcctcaactccaacacccct
cccgagttggtcaaggatgtccacaggcagatgatcgatgcgcggtcggagctcaagctg
ctgtacgtgacgcctgagaagatcgcgaagagtaagcgcttcatggcgtgtctggagaag
gcctacaaagctaaacttctgaccaggatcgctatcgatgaagtccactgctgcagtcag
tggggtcatgatttccgaccagattacaaaatcctcggcttgctgaaacgtcagttcact
gaaaccccaatccttggactcactgctactgcaacgatggatgttcttgatgatgtgaaa
ggcattctgggattgcaaggttgtcaggtgttccgagctggattcaacagaccaaatctc
ttctatgaagtacgccccaaaccgtccaagcacgcagactttgttgaagaactgatcagg
ctcatcaacggtgagttcaaaggccaatcggggatcatctactgtttctcaaggaaggat
gcagagactatggcagaaagcttgaaggatggtggaattcaagcccatccctaccatgca
atgcttgatgctcattacagaagccaagtacataagaattggaaggagaataatatacag
gttgtcgtagcaacggtagcgtttggaatgggcatcgacaaacctgacgtgaggttcgtt
atacatcactcaatcagcaagtcaatggagaattactaccaggaaagcgggcgtgctggt
cgcgatgatgaacccgccaagtgcattgcatactatggtttagctgatgtatttagacag
agcactatggtcgtgactgaacagacggggcaacagaagctctataacatggtggcctac
tgtgtcgctcctgccacgtgtagacggaccctgattggtcagcattttggagagcgttgg
gaaggccaagcaagatgtaataaaatgtgtgacgtatgccgaagtggagcaaaagttgtt
gaaaaggacatgttaccccatctccagcgtatctacaccattcttgaccacaagtctaag
ggtgataatagggtcaccgctctcaagctgactgaggaactcatgagtaagaagggcgta
gctgctctagacaaagaccaagccaagaagatgacaggtttagattacggatacctcatt
gctcacttcctcctcgagggttacctgagagaggacttccatttcaccccctacaacacc
atcagttacatcatacccggccccaaggctcgggtactcgccaccaaaccccagaggtca
atcacagttccgttcaagcttgaggatggacacatgtcaaaggtcaaagttcatagtggg
aaaggccagaaggagaaaggcagcaggggagatgccccagcgaccaagactcgggaggat
gagaggaaaaaagggagagatgagagtgggaggggctctgaagttcggaaaaccgaaggg
gaggggcatcgtgggaagaccaagaagcggaagttggtcgaggaggcgagcattatcgat
ctgtgcagtgatgatagcgatgatgaggactttacggagaggaaacccaccaagaaatct
ggcaagtccgccaagctgtccaccacgatggaaggaacttgtaatgtgagggatagtgtt
ggcagtaagggggcgagtactgcacagaagtgtcggggtgggactgatgaaaaagtgcaa
tccgctgcagcacagaagtcaagcagtgggactacagtattagatagaactgatgcagga
tcaagtaagaatagcagcaatgtcacagaacactcaggtcaaagccaaccggcaaagcac
gctccatccaaagacaacaactcagaatcaggtccattcaccttcaaatccattacctcc
acacaaagtctcgccagctcacattcaaaaggtgctcattcagccaatcagggtccagga
aaggagtcacaagatcttgccagagcgtccaagcccaaccaaccaggctccagtaccagt
gagccgtcgtcaaagagcaacagcagaagcaacttcccggactcccagcgctctccgccc
gctgccgtccatcggagggctccctctatgggattatcgcccggttcagacgtggagatg
gacctgcggagcgtctacacccaacagcttatgaatcttgggagtgagggcgagagcttc
aatcgggagaacagtagtttcaccatgtccacctctttctcaggaagcgaagatgggttg
gggaacactcccgcgagccggagacggaaggggacgatgcgtcgggtggacagcatggac
acctgtgacgaagatgattccatgcgtgatgactacgaaaccttgaagaaagtgtattca
gatcaaatgaagagacttgatgaccctatataa
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