Lytechinus variegatus (green sea urchin): 121422060
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Entry
121422060 CDS
T11173
Name
(RefSeq) beta-1,3-galactosyltransferase 1-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lvg01100
Metabolic pathways
Module
lvg_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121422060
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121422060
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
121422060
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121422060
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
ERK-JNK_inhib
Motif
Other DBs
NCBI-GeneID:
121422060
NCBI-ProteinID:
XP_041472797
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Position
9:complement(24988886..24991399)
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AA seq
397 aa
AA seq
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MERLSTCSMSKRNVIVLCATFASSFLAATCVCMVITATLVENPTKVGWLKTVRWTPGTLQ
VAIYDFLINPLDTCQLETKSNTLLILVKSATSHTSRRNVIRETYIDSIQEFNLSARVLFV
LGNTKDKHETESIWEEAELYGDILQVDFADHYYNLTIKLVMSLKWAVNFCSDTEFVMSID
DDVMLDVVTLVRDLESLPMERQSDFFLGKPNIGPPDRNAYSKWYIPRELYPEDTYPVSPF
GHGYVMSQDVVQKLYEASTECLPRVPFDDVYCGMLLQRRNIEIVDRLNFYKELHPKRRSK
DYMKLQLSENEMKRTWNCMRLENLYGSAQRFTCENSVLFILILISLLITIIVRNWYHHNL
EHSRTLSRTLGFSGLILSISRKKLGSKTFQGRNFSFV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctttcaacatgttcaatgtcaaaaagaaatgtgatcgtactctgtgctaca
ttcgcttccagctttcttgcggcaacgtgtgtttgtatggtgattaccgcaaccttggtc
gaaaacccgactaaagtgggctggttgaagactgttcgttggacacctggtaccctacaa
gttgccatctatgacttcttgattaatcccttggatacatgtcagttagaaacgaaaagc
aacacgttgctgatattggtcaagtcggcgacctcccacacatcgcgtaggaatgttatc
cgggagacttatatcgattctattcaggagttcaacctgtctgccagagtgttgtttgtc
ctaggaaatactaaggataaacatgagacagaaagcatctgggaggaggctgaactgtat
ggggatatcttgcaggtggactttgccgaccattactacaacctcaccatcaaactcgtg
atgagcttaaagtgggcggtcaatttctgtagcgacaccgagtttgtgatgtccattgat
gacgatgtcatgcttgacgttgtgactcttgtccgggatttagagtcgctgccgatggag
cgtcagtcggacttcttcctggggaagccaaacatcggcccaccagaccgaaatgcgtac
agcaaatggtacatcccgagagagttgtacccagaggatacctacccagtgtcaccgttt
ggtcacggatatgtaatgtcacaggatgtggtacagaagctctacgaagcctccacagaa
tgccttcctagggttccatttgatgacgtctactgcggaatgctgttgcaaaggagaaac
atcgagattgtcgacagactaaacttctacaaagagcttcatccgaagagacgatccaaa
gactacatgaagctacagctctccgaaaatgagatgaagcgtacttggaattgcatgcgc
ttggaaaacctctatggatccgcccaaaggtttacatgcgaaaattcagtcttatttata
ctaatattgatttcattactcattaccatcattgtaaggaattggtaccaccacaatctg
gaacatagtagaacgctttcgaggacactgggtttcagtggcctcatactctccatctca
agaaaaaagttaggtagtaaaacatttcaaggacgcaatttttctttcgtgtaa
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