Lytechinus variegatus (green sea urchin): 121422243
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Entry
121422243 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7-like
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121422243
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121422243
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
121422243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_SCAP
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_WDR75_1st
zf-RING_UBOX
Beta-prop_WDR90_POC16_2nd
Prok-RING_4
zf-C3HC4_2
WD40_like
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Beta-prop_IFT122_1st
Sina_ZnF
PKcGMP_CC
zf-TRAF
zf-RING_2
DUF16
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
SlyX
DUF4164
Beta-prop_Nup120_160
WD40_2
zf-RING_6
DUF641
Filament
Fib_alpha
HMMR_N
TRAF3_RING
KIF21A
Fzo_mitofusin
UPF0242
DUF1664
Motif
Other DBs
NCBI-GeneID:
121422243
NCBI-ProteinID:
XP_041473085
LinkDB
All DBs
Position
10:1066990..1109391
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AA seq
660 aa
AA seq
DB search
MAASSVDSGNELEEEVRGLSVNSSRSSSPKEQNSLNVASPSSASTVALTTPINIPVSGSI
NLSGDNNSLAPPSPTFKNRSSSSASYNEDMDSAIEVLVFVEQPNRTLYCLLCRMVFQDPV
ITQCGHTYCRKCVTSRQFEKCPVDNMKLAVVVNNIAVNEQVGELLIHCKYGCKPSQINLG
EYEVDPEGCPFTIRISDRKEHESQCGYAPVRCPNNPDCPLVLKMNLESHLLNCNLCKCDH
QRYGCHFVGTQEQVEAHLSQGQCAYDSIKDFLSASDDKIRELQMTIHQKDQEIGFLRSML
GKLSERVDRLEKSMEMKINYMDDNINRVEKTIVDLDENQRTISEELIDHERNYTMVNREL
SVINARLNSGAAGAYDPQQVYKCKGTFVGHQGPVWCLCVYGDLLFSGSSDKTIKAWDTCT
NYTCQKTLEGHNGIVLALCTHGNRLYSGSADCTIMVWNIDALELEKTIPAHENPVCTLVA
ANNMLFSGSLKVIKVWDLHTHQLKRELTGLNHWVRALVANGNYLYSGSYQTIKVWDLNTL
EIVHSLQTSGGSVYSIAITNHHIIAGTYENCIHVWDKNEYSQIETLTGHVGTVYALAVIS
APGMTKVFSASYDRSLRVWNMENMICTQTLIRHQGSVACLAVSRGRLFSGAVDSSVKVWQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcgtcggtggattctgggaatgaactagaagaggaggtgcgaggcctgagt
gttaacagctcccggagttcctccccaaaagaacagaattccctcaatgtggcttcgcca
tctagtgcttcaacggttgccctgacaacgccaatcaacataccagtctcaggtagtatt
aatctaagtggagataacaactcattggccccaccatcacctacttttaaaaaccgaagc
tcctccagtgcctcttacaatgaggatatggacagtgcaattgaggtccttgtatttgtg
gagcaacctaatagaaccttgtactgcctactctgtaggatggtcttccaagaccctgtt
attactcagtgtggacatacctattgtagaaagtgtgtgacttctagacaatttgaaaag
tgccccgtggataatatgaagctagctgttgtggtgaacaatatcgctgtgaatgaacaa
gttggagagttattaatccattgcaagtatggttgtaaaccaagtcagatcaatctaggt
gaatatgaagtagatccagaaggatgcccattcaccatcaggattagtgatagaaaagag
catgagtcacagtgtggctatgcccccgtccgctgccccaataatccggattgtccgctc
gtcctaaagatgaatctggaatctcatctcttgaactgcaacctctgtaaatgtgatcat
caacgatatggttgccattttgtaggcacgcaagaacaggtggaagcacacctatctcag
ggtcagtgtgcctatgacagcatcaaagacttcctctctgcctccgatgataagatccga
gaactccagatgaccatccaccagaaggaccaggagataggtttcctgcgctccatgtta
ggcaagctctcagagagggttgacaggctggagaagtcaatggagatgaaaataaactac
atggacgataacatcaaccgagtagagaagacgatcgttgatctggatgagaaccagagg
acgatctcggaggagctcatcgaccatgagagaaactataccatggtcaatagagaactc
tctgtcatcaatgctaggcttaactcgggagcggctggagcctatgatcctcaacaggtc
tacaagtgcaaaggaacgtttgttggacaccagggtcctgtgtggtgtctatgtgtgtac
ggtgatcttctcttcagtggttcttcagataagaccatcaaggcatgggatacctgtacc
aactacacatgtcaaaagacgttagaaggccataatggcattgtcttggcgctctgcaca
catggaaaccgtctgtacagtggatctgcagattgtacaatcatggtgtggaacatcgat
gcccttgaacttgagaagacaatcccggcccatgagaaccccgtttgtacgttggtggca
gcaaacaacatgctcttcagtggttcattgaaagttattaaggtctgggacctacataca
catcaactcaagagggagcttaccggactcaatcattgggttagggcgctggtcgccaac
ggaaactatctctacagtggctcttatcaaacaattaaggtatgggatctgaacacattg
gagattgtacacagtctgcagacaagtgggggcagtgtttattctatcgctatcaccaat
catcacatcattgctggaacatatgagaactgcatacatgtatgggataagaatgaatat
agtcagattgagacattgactggtcatgttggtacagtctatgctctagctgtcatcagt
gctccaggaatgacaaaggttttcagtgcttcatacgatcgatcattaagggtatggaac
atggagaacatgatctgtacacagacactcatcagacatcagggtagcgttgcttgtcta
gctgtctcaagagggcgcttgttttctggagctgttgacagttcagtcaaggtttggcag
tga
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