Lytechinus variegatus (green sea urchin): 121422278
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Entry
121422278 CDS
T11173
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121422278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121422278
Spliceosome [BR:
lvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121422278
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
121422278
NCBI-ProteinID:
XP_041473135
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Position
10:complement(33180874..33210436)
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AA seq
493 aa
AA seq
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MSLADELLADLEEIAEEGNIVDDDNDQDDDIIQDVSMEMDSREASITCIAKLRDSQELQG
VLTQIKYYQENPRKGEVMGPVEANPEYQLIVQANNLSVEIDNEINIIHKFVRDHYQKRFP
ELDSLVPNSFEYLGTVKELGNDLEKAKNNEKLQEILTNAVIMIVSVSASTTQGTSLTQQE
LSTVFEACDMAFDLKQAKTDIFTYVESRMSFIAPNLSIIVGASTAAKLMGVAGGLTNLSK
MPSCNVLVLGAQRKTLSGFSSSAVLPHTGYIYYSDIVQATPQDMRKQAARLVSAKCTLAS
RIDSFHESPIGTMGLNLRAEIERKLAKMQEPPPPKQIKALPVPLDQPRKKRGGRRVRKMK
DKLGMTDMRKQANRMNFAEIEEDAYQEDLGFSLGQVGKSGTGRVRAAQVDNKTQVKISKS
LQRQLHRQQMHGGRSTVRGRETAGTASSVAFTPLQGLEIVNPHANEIKAKEANDRYFSAM
SGFQTVKDNAVGN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgatgaactcttggctgatttggaggagatagctgaagaaggcaatata
gttgacgatgataatgatcaagatgatgatatcattcaagatgtgtctatggagatggat
agcagagaagcttctatcacatgtattgccaagcttcgtgatagccaggagttgcagggc
gttttgacacaaatcaaatattaccaagaaaatccaagaaaaggagaagtaatgggacct
gtcgaggctaatccagagtatcaacttatagtacaggcaaacaacttatcggtggaaatt
gacaatgaaatcaatatcatccacaaatttgtcagagaccactatcagaagcgcttccct
gagctggactccctggttccaaattcttttgaatatcttggtacagtaaaggaacttgga
aatgatttagagaaagccaagaacaacgagaagctacaggaaatcttgactaatgctgtc
attatgattgtcagtgtgtcagcttcgacaacacaaggaacgtcactcactcaacaagaa
ctgtcaacagtctttgaagcatgcgatatggcctttgatttgaagcaagcaaagacagac
atcttcacctatgttgaatcaaggatgtcttttattgctcctaatctttctatcattgtt
ggtgcctcaactgctgctaaacttatgggtgttgctggtggtctaaccaatctctctaag
atgccttcctgtaatgtattagtattaggagctcaacgcaagactctctcagggttctct
agttctgctgtcttgcctcatactggatatatctattacagtgacattgttcaagcaaca
ccccaggacatgaggaaacaggctgctcgtctggtgtcggccaagtgcactctagcctca
agaattgatagctttcatgagagtcctataggtacgatgggattaaatctcagagcagag
attgaaagaaaacttgccaagatgcaggagcctcctccacccaaacaaatcaaagcttta
cctgtccctcttgatcaaccaaggaaaaagagaggaggaagaagagtgcggaaaatgaaa
gacaagcttggcatgactgacatgagaaaacaagcgaatagaatgaactttgcagagatt
gaagaagatgcttaccaagaagacttgggattctctctgggacaggttggcaaaagtggc
acaggaagggtgcgagctgctcaagtagacaacaagacacaggtcaaaatatccaagagt
ttacagagacaactacatcgacagcagatgcatggtgggagatcaacggttagaggacga
gagacagctggtactgcatctagtgttgccttcacgccgttacagggtcttgagatagtg
aatccccatgccaatgagatcaaagccaaggaagccaatgatcgatacttctcagcaatg
tcagggtttcagactgtcaaagataatgctgtaggaaactga
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