Lytechinus variegatus (green sea urchin): 121422321
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Entry
121422321 CDS
T11173
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121422321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121422321
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121422321
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GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_NLRC4
LRR_4
Pes-10
Motif
Other DBs
NCBI-GeneID:
121422321
NCBI-ProteinID:
XP_041473220
LinkDB
All DBs
Position
10:6208340..6228818
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AA seq
571 aa
AA seq
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MADVSGVTELLAKTSVDQLIEVSFSGKGLKLNSAEDAKEVVAAIKACDGMQSLKLNGNTV
GVEAAKALAKSLESKPEFQRARWSDMFTGRLRAEIPPALMSLGAGIMTAGAHLVELDLSD
NAFGPDGVKAVRELLESTSCYTLSEMRFNNNGLGIGGKLMAEALITCHEKSTKAGKPLAL
KVFIAGRNRLENPGAIALAKAFKTIGTLEEIAMPQNGINHEGITALAEAVEHSHNLKILN
LNDNTFTAKGAIPMAKAVKNLKKLEVINFGDCLVRSEGADAIADSLREGVPNLKELNLAF
GEIKRESAVRVAESMDTKPHLKLLDLNGNSIGEEGIELIQGIMDANNHADALGTMSDDEG
SDEEEDDDDDEYEDVEDDEDVEDEKGGLESKDPHLQIKGTAISPRREEPKYMIPVTAADF
LAFPTADKLQALGNQRAEKILQELGDEVYEESAGVKAFVKISSVMDQKNNNVKNAVYQCA
DAILKKLFDKCKAETVVNSVLVHLGLIKGEEKLKPVGDPSGMLLTLEHAVKQHYYPKSTA
QIFKAFLSKPDNRIDRCVKEKHLLLQALFQL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtttctggtgtgacagaattattagcaaaaacatcagttgatcaactcata
gaagtgtcattctctggaaaaggactgaagctgaattcggcagaagatgctaaggaagtt
gttgcagcaataaaagcctgtgatgggatgcagtcattgaagctgaatggcaacacagtt
ggtgtggaggcagcgaaggcacttgcaaagtcactcgaatctaaaccagagtttcagagg
gcgagatggagtgacatgtttacagggaggttacgagctgaaatacccccagcattgatg
agtcttggtgctggcatcatgacagctggggcacacttggtggagcttgacctgagtgat
aacgcgtttggtccggacggagtgaaggctgttagggaattattagagagtacatcctgc
tacacactcagtgagatgaggtttaacaacaatggtcttggcattggtggaaagttaatg
gcagaagccttgatcacgtgtcatgagaagagtactaaggcaggcaaacctctggctctc
aaggtttttatagctggaagaaataggctagagaaccctggggcaattgcattagccaag
gctttcaagacaataggaacattagaagagattgccatgcctcagaatggtatcaaccat
gaaggtataacagcacttgcagaagcagtagaacacagtcacaatctcaagatcctgaat
ttaaatgacaacacattcacagcaaagggagcgataccaatggcaaaggctgtaaagaat
ctaaagaagttagaagtgattaactttggtgattgtttggtgagatcagaaggagcagat
gctattgcagacagtctgagggaaggagttcctaatctcaaggaactgaatctggcattc
ggtgagatcaagagggaatccgctgtcagagtagccgagagtatggacaccaaaccacat
ctgaaactgctcgacctcaatgggaacagtataggagaagaaggcatagagttaatccaa
ggaatcatggatgctaacaatcatgctgatgctctaggaaccatgagcgacgacgaagga
tcggatgaggaggaagacgacgacgatgacgagtacgaagatgtggaggacgacgaggat
gtcgaagatgagaaagggggactggaatccaaagatcctcatctccaaatcaaaggaacg
gccatctcaccaaggagagaggaaccaaagtatatgatcccagtcacggcagcagacttt
ctagcattccctactgccgataagctacaagctctcgggaaccagcgtgcagagaagatt
cttcaggagctaggggatgaggtttatgaggagtcggccggtgtcaaggcattcgtgaag
atctcgtctgtgatggaccagaagaataataatgtcaaaaatgcagtctatcaatgcgca
gatgccattctgaagaagctatttgataaatgcaaagctgaaactgttgtgaattctgtt
ctggttcatcttggcctgatcaagggagaagagaagctgaagccggttggagatccctca
ggaatgcttctgactctagaacatgctgtcaaacaacactactatcccaagagcacagca
cagatcttcaaggctttcctctcaaaacctgataacaggatcgatagatgcgtcaaagag
aaacatcttttgctacaagcactctttcagctttga
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