Lytechinus variegatus (green sea urchin): 121422446
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Entry
121422446 CDS
T11173
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase-like
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
121422446
Enzymes [BR:
lvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
121422446
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
121422446
NCBI-ProteinID:
XP_041473425
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Position
10:complement(34650207..34668054)
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AA seq
720 aa
AA seq
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MSSQAEQNSLAAEFMSKVKIADYPDLGNRFEPKTSEPITRPLDTLDEVLLWQPDDKFNVA
NSPLATPTIPAGPRPMTLVCHDMKGGYIDDRFVQGVPVSSAYRFYHWQYIDIFIYFSHHF
VTIPPPCWTDAAHKNGTLMLGTVITEWQDGKKRCAEMYGSEATYKRFADKLVEIAKYYNF
EGWLINIENPIPPEHMPQLLGFVDYLTKQMHQHIKGSKVIWYDSVIADGSLRWQDMLNDN
NRIFFDASDAIFLNYTWNENKLATSVQNAGPRKHDVYVGVDIFGRNCFGGGGWNTYKAME
VIKRQGLSTAIFAPGWVMEKLGETDFIANQDKFWSLLDPYLYTHGVSSLPFVTNFCRGYG
EFGFKCGNEVMKKAWCNLSSQQIVPTYGTEQFCNTEGASKKTSMQYLVSDGFNGGGCIEI
HGGLAANQITRCKLFATGISGSHPLLVSYTVKHADNCKVCLYLSTPNKDILLWNTSDDMK
AGEQPMSTYGLRLSALIDQSTVPDAIKSSEPTIFSPLVGTCHKILQDAFFGIDSSVIPTQ
GWVTRNYLLPESVLVAGGKITEIGVLCFSADPVESYSVKIGEIKVVNPSSLRDQTQQVTD
LSCSDITWHPPIADVVDPHTVVSLCATLSWSYPAGLGHHFDIYCSGVERDPNQSRAVSKS
DKLFVGRAHSHSFRVCHLLIPKLEKKGQVDSIEFCVQPTTRAGFSAPLLGVSSCKVVYSN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccaagcagagcagaacagccttgctgctgagttcatgtcgaaagtgaagatt
gctgactatcctgatttagggaaccgatttgaacccaagacttccgagcctattactcga
ccactcgatactcttgatgaagtattgttatggcagccagatgacaagttcaatgttgca
aactcccctcttgctaccccaacgatccccgctggacctcgacctatgacccttgtgtgc
catgacatgaaaggaggttacattgatgaccgatttgtccagggagtgcccgtcagctcc
gcctaccgtttctaccactggcagtacatcgacatcttcatctattttagccatcatttt
gtcaccattcccccaccctgctggacggatgctgctcataaaaatggcaccctcatgctt
ggaaccgtcatcacagagtggcaagacggtaaaaagaggtgtgcagagatgtacgggagc
gaggcaacctacaagagatttgccgacaagctggtggagattgcaaagtattacaacttt
gaaggctggctcatcaacatcgagaacccaattccacccgagcacatgccccaactccta
gggttcgttgattacctcactaagcagatgcaccagcatatcaaagggtcaaaggtcatc
tggtatgacagtgtcatagctgacggctccttgcgctggcaggacatgctgaatgataac
aataggatcttctttgatgccagtgatgctatcttcttgaactacacatggaatgagaac
aaactcgctacctctgttcagaatgctggtcctaggaagcatgatgtctatgttggggtt
gatatctttggaaggaattgctttggtggaggaggctggaacacttacaaggccatggaa
gtgatcaagaggcagggtctctcgacagccatctttgctccaggctgggtcatggagaaa
ctaggagagacagactttatcgccaaccaagacaagttctggtctttgcttgatccttat
ctgtacacccatggagtctcctcgcttccctttgtcacaaatttctgcaggggatatgga
gaatttggtttcaaatgtggaaatgaggtgatgaagaaagcatggtgtaatctgagcagc
cagcagatcgtaccaacctatggaactgagcagttctgtaacacagagggcgcttcaaag
aagacatccatgcagtacctggtgtccgatggcttcaatgggggtggttgtattgagatc
catggaggactggcagccaatcagatcaccagatgcaagttgtttgctaccggtatctct
ggatcacaccctctacttgtctcatacacagtcaaacatgctgataactgcaaagtatgt
ctttatctatctacaccaaacaaggacattctactgtggaatacatcagatgacatgaag
gcaggtgaacagcctatgagtacatatggcctgagactgtcagccctgatcgaccaatcc
accgtacctgatgccatcaagtcatccgaacccaccatcttctctcctctggtcggcacc
tgtcacaagatcctccaggatgcattctttggcatcgatagctcagtgataccgacccaa
ggttgggtcacaaggaactaccttctaccagagtctgtgctggtcgctggtggtaagatc
actgagattggtgtactctgcttctcagctgatcctgttgaatcttactcagtcaagatt
ggtgaaatcaaggtcgtcaacccaagctctcttcgagaccaaacacagcaggtcactgac
ctctcttgttcagacatcacctggcatccccccatcgctgatgtcgttgacccccatacc
gttgtttccctctgtgccactctatcatggtcttaccctgccggccttgggcaccacttt
gacatttactgctctggcgtcgagcgcgacccgaaccagagccgggccgtcagcaagagt
gataagctcttcgtcgggagggcgcactcgcacagcttccgcgtgtgccaccttctcatc
ccgaagctggagaagaaaggacaagtggacagcattgagttctgtgtgcagccgacaacg
agggcaggcttctcggctcctctcctaggggtctccagctgtaaagtggtatactccaat
tag
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