Lytechinus variegatus (green sea urchin): 121422686
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Entry
121422686 CDS
T11173
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04120
Ubiquitin mediated proteolysis
lvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121422686
04120 Ubiquitin mediated proteolysis
121422686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lvg03110
]
121422686
04131 Membrane trafficking [BR:
lvg04131
]
121422686
04121 Ubiquitin system [BR:
lvg04121
]
121422686
Enzymes [BR:
lvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121422686
Chaperones and folding catalysts [BR:
lvg03110
]
Other chaperones and cochaperones
Others
121422686
Membrane trafficking [BR:
lvg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121422686
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
U-box type E3
121422686
Multi subunit type E3
STUB1-CHIC2 complex
121422686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_2
TPR_1
TPR_11
TPR_17
TPR_8
TPR_16
ANAPC3
TPR_9
TPR_7
TPR_CcmH_CycH
TPR_19
ARM_TT21_C
TPR_12
TPR_BSK1_C
NRBF2_MIT
zf-NOSIP
DUF6309
Motif
Other DBs
NCBI-GeneID:
121422686
NCBI-ProteinID:
XP_041473785
LinkDB
All DBs
Position
10:26563475..26590467
Genome browser
AA seq
287 aa
AA seq
DB search
MNIKMNATELKEQGNRFFGSRKYEEAIGCYNKAIMKNPSDPKFFTNRALCQIKLRHWDHG
ADDCRHALELDPSNIKAHFFLGHTLVEEERYDEAITSFRRAHDLAREQKVNFGDDIAAAL
RSAKKKRWNILEEKRIAQEIELQAHLMNLMEEDKQRKIDALKEKIGDQDGEEDKDIHTDA
TKKIEEDFERHQKELNRLFASVDERRQKREVPDYLCGKISFELMRDPVITPSGITYDRKD
IEEHLQRVGHFDPVTRSKLIQDQLIPNLAMKEVIDTFLCDNEWVEEF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaagatgaatgctacggaactaaaagaacaagggaatcgcttctttggatca
cgcaaatatgaagaggccattggttgttataacaaggccataatgaaaaacccatcagat
cccaagttctttaccaatcgagctctgtgtcagataaagctgagacattgggatcatggt
gcggatgactgtcgacacgctttagaacttgatccctccaacatcaaggcacatttcttc
ctgggacacacactagttgaagaggagagatacgatgaagccattacaagctttcgcaga
gcacatgaccttgccagagaacagaaagtgaattttggggatgacatagctgctgcacta
aggtcagcaaagaaaaaaagatggaatatcctagaagaaaagagaattgcgcaagagatt
gaactgcaggcacatcttatgaacctcatggaagaagataaacaaagaaaaattgacgct
ctgaaagagaagataggtgatcaagatggggaggaagacaaagatatccatactgatgcc
acaaagaagattgaagaagactttgagagacatcagaaggaactaaatagattatttgct
tccgttgatgaaaggagacagaaacgtgaagtcccagattacctttgtggcaagataagt
tttgaattgatgagggatcctgtcatcacgcccagcggtatcacgtacgatcgcaaagat
atcgaggaacatctacagagagtgggtcatttcgaccctgtgacacgctcaaagctgatc
caagaccagcttatacccaacctagcgatgaaggaggttatcgatacattcctatgtgat
aatgaatgggtggaagagttctga
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