Lytechinus variegatus (green sea urchin): 121422759
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Entry
121422759 CDS
T11173
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05027
calcium-activated chloride channel regulator 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121422759
Ion channels [BR:
lvg04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121422759
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
VWA_CoxE
fn3
VWA_3
SusE
Motif
Other DBs
NCBI-GeneID:
121422759
NCBI-ProteinID:
XP_041473873
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Position
10:8899628..8944650
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AA seq
1212 aa
AA seq
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MASKPGVYIFFMGIACLMMIQVGAMISQSSVVLENGGYNNIVLAIDESLEENDDLISAIK
KMFVDGSRFIYQASRKRVYFKGVTILIPSLWSTKSEYQSPGRLTFDMADIRVARPNPLWA
PNPYTHQVQGCGKPGSYIHFIEEFMTSPKTKDSYGPLGRVLVHEWGHLRWGLFNEYPDAV
GDQKDISHFYQSMKDGQYKPVTCSQEIEIRALIRSDEDGSEYRRCQGNEYSGYEEGCMAI
PKDPGSATGSIMYGMLKFQEISNFCDKDESDPGNLHNREAPNKHNRLCESRSAWEVMREH
EDFKDNNSPPRELSDADIMPSFTLAQARSSDDCRIVLVIDTSGSMSTNDRITKAMSASTA
FIDLVSEGTWVGIVGFIDTADIIHRLVQVSSPAERSSLRDSLNLVATGGTCIGCGLETGL
QVLRAHPSGDLAGADILLMTDGEDSNFATHTIRPILLAEGVRVNTVAIGDDAYGELNTVS
LETGGRPFSYGDNDGTASLTTSLSQTAQNCLGDRSKERVQLSAIGATLGEREVKSGHIYI
DPSIGSRTQFIVTYTEGSDVTPGVTLIITQPSGKTTSPGSSEYNDNVQRKVINVVIDGKA
ETGKWFYQIENVYTGPQSVTFSVFSTPNLEDVEEGNVINVKSYTSTSILNQSDNLKPLIT
YAEVTQGSMPVINATVKASVERPGGDIMTYELLDNGAGADITANDGVYSRSFLDYTGEGY
YGIGITAENDGSAVILTGSVGSSATPFINITDDGKVVSDATIGNYTMRLPGDQIFDNLVL
EKAAPFTRSSSAGSTNVPTLPQNFTPGQDQFPPNRVHDLRVKLTSVNDSSVVLTWTAPGD
DLDTGTAISYDIRVSHSSALISTNFSDATRVEFHQILRGNMSSPKTFGSVEEYEIRVEDV
PGVTSFSYAFALRASDDAGLTSSVSNVVMATFRRVIPTAPAPTVGPCNGMLCHNGGTVDQ
SSCSCVCSELSQGENCQYVKSQLRNGVQIDLRGNTAQWTDIVAPLLESVTQQLNIFCNSN
FAVCCQGRANISSETTRIVFVTGNDVKLADGYPVIKGPADDGELCSFVVYALKAAGQDIC
SDASGTLSKWKREVRLNIKRRSVEPTFVSQDLLFEAILSGRLAISTHLANASSEDISIGN
ITLPVVEGDTVPIENKPPRSGLSAAVIATICILIILITIFLLGIAYYYKWLRLRKDPSYH
VARKSDLEEGQE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaagccaggtgtatatattttcttcatgggaatagcatgtctgatgatgata
caagtaggagcaatgatatcgcagtcgtctgttgttttggaaaacgggggatataacaat
attgtgctagctattgatgaaagtctagaagagaatgatgatttgatatcggcaataaag
aaaatgttcgtcgatggatcacgttttatataccaggcctcccgaaaacgagtttacttc
aaaggtgtcactatcctaatcccatccctctggtcaacaaaatcagagtatcaatcacca
ggacgattgacctttgacatggctgacatccgcgtggcacggccaaatcctctgtgggcg
ccaaatccttacacccatcaggtccagggatgcggaaagcccggaagttacattcatttt
atagaggaattcatgacgagccctaaaaccaaagactcatatggacccttaggaagagtg
ctggtacatgaatggggacatctcagatggggactgttcaatgaatacccggatgcagtg
ggtgaccaaaaggacataagtcatttctaccagtcaatgaaagatggacaatacaagcct
gtaacttgtagccaggaaattgagattagggcactgatcagatcagatgaggatggttct
gaatatcgaagatgtcagggaaacgaatacagtgggtacgaagaagggtgtatggcaata
ccaaaagatcctggatctgccactggatctattatgtatggaatgctaaagtttcaagag
ataagcaacttctgcgacaaagatgagagcgatcctggtaaccttcacaacagagaagca
cccaacaaacacaatcgtctctgtgaatcaaggagtgcatgggaagttatgagggagcat
gaagactttaaagacaacaactcgccgcctcgggaattgagtgatgctgacatcatgcca
tcgtttacactggcacaagctcgaagtagtgatgattgtcgtatcgtcttagtcattgat
acatcggggagcatgagtacgaatgaccgaatcacgaaagcgatgagtgcatccactgct
tttattgatttagtcagtgaaggaacatgggttggtatcgttggttttatcgataccgct
gatattatacatcgattggtacaggtctcttcgccggccgaaagatcttcgttacgtgac
agcttgaatcttgtcgccactggcgggacatgtatcggatgtggcttagagactggacta
caggtgttgcgagcacatccgtcaggagacctagctggagcagacattttattgatgact
gacggagaagacagcaattttgctacccatactataagaccgattttactggcggaaggg
gtgagagtcaacacagtggcaattggagatgacgcttacggtgaactaaacacagtttct
ctggaaacaggaggaagacctttttcctatggtgataatgatggcactgctagtctgacc
acttctctcagtcaaactgctcagaactgtttgggagatcgttccaaagaacgcgtacag
ctttccgccataggtgctactcttggggaaagagaagtgaaatcaggacacatctatatt
gatccctcgataggctccaggacccagttcatcgtaacttacactgaaggctcagatgtc
acaccaggagttacacttatcatcacccagccaagtggcaagactacatcgcctggtagt
tctgaatataatgacaacgtccagcgaaaggtcatcaacgttgtaattgacggtaaagca
gagactggcaaatggttttatcaaattgaaaacgtgtacactggccctcagtctgtgaca
ttttccgtcttctccacacctaatctcgaagatgtagaagaagggaacgttatcaatgtg
aagtcctacaccagcacctcgatcttaaaccaatctgataacttaaaaccactaatcact
tatgctgaggtcactcaagggtccatgccggttataaatgcaaccgtcaaagcaagcgtg
gaacgcccgggaggtgatattatgacatatgaacttctagacaatggtgcaggtgccgat
atcactgcaaatgatggtgtgtacagccgatcatttcttgattacactggggaaggttac
tatggtattggcatcacagcagagaacgatggcagtgctgttatcttgacgggttcagta
gggtcttcagccacgccctttatcaacatcacagacgatggaaaggtggtctctgatgca
actataggtaactacaccatgcgacttcctggagaccaaatattcgataacttggtgttg
gagaaagcggcgccctttaccagaagctcgtcagccggttcgaccaatgtcccaactctt
ccacagaattttacaccgggccaagatcagttcccaccaaaccgagtccatgatcttcgg
gttaaactgacatctgttaatgattcgtccgtggttcttacttggactgcaccgggggat
gatttagatacgggaactgctatttcttatgacatcagagtatcgcattcttcagcgttg
atttcgaccaatttttccgatgctacccgagtggaattccaccagattcttcgagggaac
atgtcaagccccaaaacatttggatcggtagaagaatacgagatcagggttgaggacgtc
ccaggtgtcacatcattctcgtatgcatttgctctccgagcctctgatgacgcgggtctg
actagttcagtttctaatgtcgtgatggcaacattcaggagggtgattcctacagcgcct
gccccaaccgttggtccatgtaatggcatgctatgtcataatggaggcactgtagatcag
agtagttgctcttgtgtttgctcagaactgtctcagggggagaactgtcaatatgtgaag
tcacaactcagaaatggagtccagatcgatcttcgtgggaacactgctcagtggacggac
attgtggctcctctactcgaatcagtgacacaacagctcaacatcttctgcaacagcaat
ttcgccgtctgctgccaaggcagggcaaatatttccagtgaaactacgaggatcgtgttt
gtgacgggaaatgatgtcaagcttgctgacggatatccggttatcaaaggaccggcagat
gatggagaattatgctcttttgttgtttatgctctgaaagcggctggccaagatatttgt
tctgacgcttcgggaacactgtcaaaatggaaaagagaagtcagattaaatatcaagaga
cgatccgtcgagcctacgttcgtctctcaagatctgctatttgaagccattttgagtggc
cgtctagccatatctacccaccttgcaaacgcctcatcagaggatatctctattggtaat
attaccctgcctgtcgtagagggtgatactgttccaatagagaacaaaccaccgagatca
ggactttccgcagcagttattgccactatctgcattttgatcatcttgattaccattttt
cttctgggaatcgcttattactacaaatggctcaggttgaggaaggacccttcttaccac
gttgcaaggaaatctgatctcgaagaaggtcaagaatag
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