Lytechinus variegatus (green sea urchin): 121422763
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Entry
121422763 CDS
T11173
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121422763
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lvg04031
]
121422763
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121422763
GTP-binding proteins [BR:
lvg04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
121422763
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
SAM_HAT_C
Motif
Other DBs
NCBI-GeneID:
121422763
NCBI-ProteinID:
XP_041473877
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Position
10:25844046..25886600
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AA seq
272 aa
AA seq
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MESPPSSPSARSYDYLLKFLLVGDSDVGKGEIMGRLDDSDSEPGSPYYGNIATGIDHKTT
TILLDGKRVKLQLWDTSGQGRFCTILRSYSRGAQGILLVYDITNRWSFDGIARWIREIDE
HAPGVPKILVGNRLHLAFKRQVSGEEAQEYAIRNDMAYFEVSPLCDFNVTESLTELSRLV
LKRNGMERLWRTNKVLSLQDFCCRTIVNCTSTYSIDKLPIPMTLRSRLKSFADANHMHRY
MLPPPDIRSKKRRTILNAQDPPYSARKSCIVS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcctcccagctctccatctgcccgatcttatgattatttgctgaagtttctc
cttgttggcgacagcgatgttgggaaaggtgaaatcatgggaaggcttgatgacagcgac
agtgaacctggatcaccatattatggcaatattgccacaggcattgatcacaagacgaca
accatattattggatggcaagagggtgaaattacaactatgggatacatcaggccaaggt
agattctgtaccatcctcagatcctactcacgtggcgctcagggcattctactggtctat
gacatcacaaacaggtggtcctttgatggcatagcaaggtggatcagagaaatcgatgag
catgcaccaggggttcccaagatcctggttggcaatcgtcttcatcttgccttcaagcgt
caggttagcggtgaggaggcccaggagtacgcaatcaggaatgacatggcatactttgag
gtcagcccactatgcgatttcaacgtgacagagtcgctgacggaactctcgcgtctggtg
ctcaagcgtaacggcatggagaggttatggaggacaaataaagtgttgagtctgcaggac
ttctgctgccggacgattgttaactgtacttccacctactccatagacaaactacccatc
cctatgacccttcgatcacggctcaagtccttcgcggatgccaatcacatgcacagatac
atgctgcccccgccagacatccgctccaagaagcgcaggacgatacttaacgctcaggac
ccgccgtattcagcgcgaaagagctgcatagtgtcatga
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