Lytechinus variegatus (green sea urchin): 121422934
Help
Entry
121422934 CDS
T11173
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3-like
KO
K22991
WD repeat-containing protein 45
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121422934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121422934
Membrane trafficking [BR:
lvg04131
]
Autophagy
Other autophagy associated proteins
Others
121422934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RSE1_2nd
WDR55
Beta-prop_IFT122_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_WDR19_1st
EIF3I
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
CPSF_A
CNH
Beta-prop_EML
Beta-prop_TEP1_2nd
DUF5711
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
121422934
NCBI-ProteinID:
XP_041474108
LinkDB
All DBs
Position
10:7556585..7574349
Genome browser
AA seq
348 aa
AA seq
DB search
MNLAERKGENSYDNNLLYAGFNQDNGCFACGMESGFRVYNCDPLKEKERQDFTDGGVGHV
EMLFRCNYLALVGGGKNPHYPPNKAMIWDDLKKKHVIELEFSSEVKSVRLRRDRIVVVLQ
SMIKVYTFTQNPQQLHVFDTCMNPKGLCVLCPNSNNSLLAFPATKTGHVQIIDLAQTDKP
PLDIAAHEGVLSCLTFNHQGSRLATASDRGTLIRVFDTGNGQQLHELRRGSGGAQIYCIN
FNQDSTMLCVSSDHGTIHVFALEADAQKNKKSHLASATFLPKYFNSSWSFCKFQVPNHAQ
CICAFGSDPNSVVAICADGSYFKFVFNNKGECSRDVYTRFLEMTDDHS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggccgagaggaaaggcgagaattcgtatgacaacaatctcctctacgcagga
ttcaatcaagacaatggttgttttgcatgtggaatggagtctggtttcagggtgtataat
tgtgaccctctaaaggagaaagagagacaagatttcacagatggtggagttgggcatgtt
gagatgttgtttcgatgcaactatcttgctttggtgggcggtggcaagaaccctcattat
cctcccaataaagctatgatctgggatgatctcaagaagaaacatgtgattgagcttgag
ttctctagtgaagtcaagagcgtgcgattaagaagagacaggatagttgtggtcctacag
tctatgatcaaagtctacacgttcacacagaatcctcagcagctgcatgtctttgacaca
tgtatgaatcctaaaggtctctgtgttctgtgcccgaacagcaacaattcattgcttgcc
ttccctgccacaaagacaggccatgtgcagatcattgatctcgctcagacggacaaaccc
cctttagatatagcagcacacgagggcgtcctaagctgtttaacattcaaccatcaagga
tcaagactagcaacagcatcagataggggcacgttgatcagagtttttgatacaggcaac
ggacaacaactccatgagctaagaagaggatcaggaggggctcagatatactgtatcaac
ttcaaccaggattccaccatgctgtgtgtgtcaagcgaccatggaaccattcatgtcttc
gctctagaggcagacgcacagaagaacaaaaaatcacacttagcatcagccactttcctg
ccaaagtacttcaactcgtcatggagtttctgtaaattccaggtgcccaaccacgcccag
tgcatctgtgccttcggttctgatccaaactcggttgtagctatctgtgctgatggaagc
tacttcaaatttgtcttcaacaacaagggagaatgcagtcgagacgtctacacgcgattc
cttgagatgaccgatgaccacagttga
DBGET
integrated database retrieval system
