Lytechinus variegatus (green sea urchin): 121423112
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Entry
121423112 CDS
T11173
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121423112
04091 Lectins [BR:
lvg04091
]
121423112
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121423112
Lectins [BR:
lvg04091
]
C-Type lectins
Others
121423112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EOS1
Motif
Other DBs
NCBI-GeneID:
121423112
NCBI-ProteinID:
XP_041474337
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All DBs
Position
10:complement(29401160..29409719)
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AA seq
947 aa
AA seq
DB search
MQNFSHLFSNHSRKNFNDGHLWFSIIARPPGSRFTRFQRAACCLMFLWLEMLVNIMFYKV
TPPPAATSPIEIGPLSLSPAQISIGIQANLIVFPVSLLVVQFFRKSRPRKMRESRIKLAA
LVNKPVRKLKRRPRKTAPADYSKLEDFASPSRIVLEESSKPAMMMNPTAGTRAEPSLVVP
PIPGTYDESVAQGGRGAGYFGGDSSPTPQGTGDATVLIQPEKPKRRKKFSFPWWFVIIAW
IVLILTLAAATTFTVFYGIQFGNKEASEWLCSIVVSFVFGIFLTQPIKILLVATFIACII
KSPNADEDTEMEEDEEEFDLRPDEEYLHTVSGTVSRKKRKLPYKPPDPEALERAREQRLK
EIKMYSIFREIFFYVVYLWVVLVISYGNSDPSAYRMQEDFFNELVIGPDSVHSFTKINSH
TSFWAYLHTTLVPTIFPLTWYNGDPSPELEGFLADQNALILGYPVLRQVRVKRGECEVVS
EFTDIVPECNVAYSVTDSDEENYGPGWTPYNPNITDRPQYNYTAWDDIESYPVLGRHALY
SGGGYLAKLQGNKTDVEALLDQLYQEAWLDRYTRGVFVEIALYNSQVDLFGVVSLLAEFL
PTGGVEPFYRIDIIRLYTYAQGFGAVRLACEILFLGFIVFFIVREINNLRREGVKKYFKT
FWNLAEWIIIACAIGATVVYFYRKYVTANLLEEFKATHGTERINLQYVAYWNELLTYLLG
VVVFIGNLKFIKLLRFNKRIGILSSTIQSCTKDLIHFGIMFGIFFIAYALAFHQMYLRHL
LDFSDFIFTMETLSAAMLGKFHYAGIAETNRILGPIFFFFFMITITFILVNMFLTIVIEA
FSSVKRDITRQSNDYEMVDFMIGQLKKWVGWNNKTKPEDKKTNPVTEMDNHDPMTEFPDK
VDQLLDCIAKVYFDASQFEDVIRGMGGSKGENTNTTKKRPVKIALTG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttctcccacctgttcagcaaccactcccgcaagaatttcaacgatggccac
ctgtggttctccatcatcgcccgtcctccagggagtcgattcacccggttccagagggct
gcatgctgtctgatgttcctttggttggagatgcttgtgaacatcatgttttacaaggtt
accccacctcctgctgccaccagccccattgaaataggcccattgagtctctctcctgct
cagataagcattggaatccaagccaacctcatagttttcccagtatctcttcttgtcgtc
caattcttccggaaatcccgtcccagaaagatgagagagtctcgcatcaagctagctgca
ttggtcaacaagcctgttcggaaactgaagcgccgacctcgcaagacagcaccagcggat
tactccaagttggaagactttgcatcaccgagcagaatcgtccttgaggaaagcagtaag
ccggcgatgatgatgaacccaacagcaggtactagggctgaacctagtctggtcgtccca
cccatccccggtacctacgacgagagtgtggcccaaggcggtagaggcgcgggttacttt
ggtggggattcatccccgactccgcaagggacaggagatgcaacagtcttgatccaaccg
gaaaaaccgaaacgacgcaagaagttttcttttccttggtggtttgtcattattgcttgg
attgtgttaatcttaactctggcggcagctaccacctttacagtgttctatggcatccag
ttcggcaataaggaagctagtgaatggctctgctcaattgttgtttcctttgtctttgga
atcttcctcacacaacccattaagattcttctggttgcgaccttcattgcctgtattatc
aaaagccctaatgccgatgaggataccgagatggaagaggatgaagaggaatttgatctc
agacctgatgaagagtacctccacacagtctctggtactgtgtcaagaaagaagcgtaaa
ctgccctacaagccacctgatccagaggcgttggaaagagccagagaacaacgtctcaag
gagattaagatgtattccatcttcagggagatcttcttctacgtggtgtatctgtgggtg
gttcttgtcatcagctatggcaattctgatccttcagcttaccgaatgcaagaagacttc
ttcaacgagcttgtaattggtcctgattcagttcattcctttaccaagatcaacagtcat
acatctttctgggcctaccttcacaccacccttgtaccgacaatattccccctaacctgg
tataatggtgatccaagtccagaactggaaggatttcttgcagaccagaatgctttaatc
ctcggttatcctgtactacgacaggttcgcgtcaaaaggggagagtgtgaagtggtatct
gaattcacagacatagtaccggagtgtaatgttgcctactccgtaacggattcagatgaa
gaaaactatgggcccggatggacaccgtacaatccaaacataacagacagaccgcaatat
aactacacagcatgggatgacatagaaagttacccagtacttggtcgtcatgccctctac
tctggaggtgggtatcttgccaaacttcaggggaataagaccgacgttgaagctctcctg
gatcagctgtaccaggaggcctggctcgatagatacacacggggagtgtttgtagagatt
gctttgtacaatagtcaggtggatctatttggggttgtcagtctgttggcggagttcctg
cccactggtggcgtagaacctttctatcgtatcgatataattcgtctttacacctacgct
caaggttttggggctgttcgtcttgcttgtgagatcctcttcctcggatttattgtgttc
tttattgttcgtgaaatcaacaacctgagacgggagggggttaaaaaatacttcaagacc
ttctggaacctggctgaatggatcatcattgcttgtgctatcggagcaacagttgtctat
ttctatcgcaaatatgtcacagccaacctccttgaggaattcaaggcaacccatgggaca
gagaggatcaaccttcagtatgttgcctactggaatgaattacttacatacctcttaggt
gttgtggtctttatcggcaacctgaagttcatcaaacttcttcgcttcaacaaacgcatc
gggatcctgtcgagcaccattcaaagctgcacaaaagatctgatccactttggtatcatg
tttggaatcttcttcatcgcttacgcactcgcctttcaccagatgtacctccgccatctc
cttgatttctctgacttcatctttaccatggaaacactttctgctgccatgttaggcaaa
ttccactatgctggtattgctgaaacaaatcggatccttggccccatcttcttctttttc
ttcatgatcaccatcacgttcatacttgtcaacatgttcctgaccatcgtaattgaggcg
ttctcttcagtgaaacgagacatcacccgccagtccaacgactatgagatggtcgacttc
atgatcggtcagctaaagaaatgggtgggatggaacaacaagaccaagccagaagacaag
aagaccaaccctgtgacagagatggacaaccatgatcctatgacagagttccctgacaag
gttgaccaactccttgactgcattgccaaggtttacttcgatgcctcccaatttgaagac
gtcatccgcgggatgggtgggtcaaagggggagaataccaacaccaccaagaaacgacca
gttaaaattgctttgacaggataa
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