Lytechinus variegatus (green sea urchin): 121423418
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Entry
121423418 CDS
T11173
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121423418
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
121423418
TFIIIC, fungi type
121423418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_8
TPR_14
TPR_1
TPR_9
TPR_16
ARM_TT21_5th
TPR_12
TPR_CcmH_CycH
ANAPC3
ARM_TT21
TPR_20
ChAPs
TPR_BSK1_C
TPR_11
ARM_TT21_N
HAT_PRP39_C
DUF7017
NatA_aux_su
PknG_TPR
BTAD
TPR_IF140-IFT172
RE_R_Pab1
CDC45
Motif
Other DBs
NCBI-GeneID:
121423418
NCBI-ProteinID:
XP_041474684
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All DBs
Position
11:25873929..25913197
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AA seq
689 aa
AA seq
DB search
MNQEEIEKEQLLRYLRGEIPFEQWVQGQQIYEQKHQFALNTDLPLPSQPQERQDDEDEDD
DDDEEEDEGDKGEEEAGPSTYSGQGYSPIHEMEIESIAGDEDLQNSAEDSALNIEMQVKR
KRGRPRGPVPPPEVRSRRRRRNRVPKSLRGLMGQAHLCFARKEHDQATKMCMEIIRQAPK
GVEPFQLLGMIYEDLGDMEKSMQFQLIAAHLSPRDTEQWHQLAEVCLERNDLEKAIYCYS
KVLRTNSHHIPTLHARARLYIRLGENKKAMESYHTIIKHLPQEEWSQGLLLARELVQRCH
KLGEVNLAIEAMETLVKRYPEHISSEEVNNLAELYISSLQYEKAIQVMSRHCGVIVEYNE
MDLSTFQGGDLEAVNVVIPDGLPIDLRVKLAICLIHSKHLTPVSMVTKPLFSEDPEDFGD
LYLDVAEAYIDINDHQSAKPILAALLKAKNYNLPAVWLRYAECLSSLGELAASSKAYSEV
LKQAPRHLDARLALAAIEQQLGRAESALQTLSLDPLDDDDDGDYILSKQDIQILYRQGIL
MYTQGHFDEFLEKGNYLLSKFIHKDNEDHADYNVITKGEWLSLIQKMCVSYGKMKRYGQA
CNLIKDALNYNIYDRDNDKPWIQKLRFMLVCASYHHENYDDAFSSIREFVNQWGEKINLM
NLFSLIVNNTLGSRHHKYCMRLTIKVSYL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaagagatagaaaaagaacagttacttcggtatcttcgtggagaaattcca
tttgagcagtgggttcagggccaacagatatatgagcaaaagcaccagtttgctttgaac
actgatttgcccctaccatctcaaccacaagagaggcaggatgatgaagacgaagatgat
gacgatgatgaggaggaggatgaaggagacaaaggagaagaagaagcgggacctagcacg
tactcaggtcaaggttattctccaatccatgaaatggagatagagagcattgctggagat
gaagatttacaaaactcagcagaagatagtgctttgaatatcgagatgcaggttaaacgt
aagcgtggtagaccgagaggtcccgtccctccgcctgaggtccgcagccgtcgtcgccgt
cgtaacagggttccgaagagcctacgagggttaatgggtcaagcccatctctgctttgcc
cgtaaggaacatgatcaagccacaaagatgtgtatggagatcattcgccaagctccgaag
ggtgtagagccctttcagttacttggtatgatctatgaggacctaggtgatatggagaaa
tctatgcagtttcaactgatagcagctcatctttctccgagggatacagagcaatggcac
cagcttgctgaggtgtgcttggagagaaatgacttggagaaggccatctattgctatagc
aaagttctgaggaccaatagccatcacataccaaccctccatgcacgtgctcgtctttac
atcagactcggggagaacaagaaggcaatggaatcctaccataccatcatcaagcatcta
cctcaagaggaatggtcccaaggtcttcttcttgctagagaacttgtccagaggtgtcat
aagctgggagaagtgaatcttgctattgaagcaatggaaacgttagttaagaggtatcct
gaacacatcagctcagaagaggtgaataaccttgctgagttgtacatctccagtttacag
tacgagaaggctatacaggtgatgtctcgtcattgtggagtgatagtggaatacaatgag
atggacctttcaacgtttcaaggaggagatttagaagcagtgaatgtcgtcattcccgac
ggacttcctattgacctgagggtcaagctagctatctgcctcatccattccaaacatctc
actcctgtttccatggtaaccaaaccactcttctccgaggacccagaagactttggtgac
ctctacctcgacgtagcggaagcatacatagatatcaatgatcaccagtcagcaaagccg
atattagcagctcttcttaaagctaagaactataatctgcccgcagtgtggctgaggtat
gcagaatgtttgagctcattgggtgagctagcagcatccagcaaagcatacagcgaggtg
ctcaaacaagctcctagacatcttgatgcaagactagccctagcagccattgaacagcag
ctaggaagggccgaatcagcactacagacactttctctcgatccattagatgatgacgat
gatggcgattatattctatccaagcaagacattcagattctctacagacagggcatattg
atgtacacccaaggccactttgatgagttcttggagaaaggaaactatctcctctcaaaa
ttcatccataaggataatgaagatcacgcagattacaacgtaattaccaaaggggaatgg
ttgagtttgattcagaaaatgtgcgtatcatatgggaagatgaagcgatacggtcaggcg
tgcaatctcatcaaagacgctcttaattacaatatatatgacagagacaacgataaacca
tggatacagaagctgagattcatgttggtctgcgcctcttatcatcatgagaattatgac
gatgctttttcatctatcagggagtttgtcaatcagtggggagagaagattaatctgatg
aacctatttagcttgatagtaaacaacactttgggatcaagacatcataaatactgcatg
agacttactataaaggtcagttacctctaa
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