Lytechinus variegatus (green sea urchin): 121423687
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Entry
121423687 CDS
T11173
Name
(RefSeq) nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121423687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121423687
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121423687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
121423687
NCBI-ProteinID:
XP_041475050
LinkDB
All DBs
Position
11:16026433..16062828
Genome browser
AA seq
1401 aa
AA seq
DB search
MAGVPQNVQSMEASLQEAGGHVDIFLNKDKGFPALEDLISAARTGPATMSGTTDNDFPSL
AAPSIGLADLPLLGPTKKTPLPPELVEQFGHMQCYCMMGAFPEISRAWLSIDTDIFVWNY
QDGGDLAYFDGLSETILYAGLVRPKPNIFRPHIRFLMCIATTVEIVLLGVSFTRPREDID
PDDFAQSEMHLIPEPLFAIPSDNSHITNIHGTKDGRIFMASKDGCLYELVYQAQDGWFSR
KCRKVNHSSGVLSYLIPSMLQFSDKDPMVQIALDESRHILYTRSEQGTLSVYDMGSDGKD
MKRITSIYYSSILRETIAAAKTIDRSHFKQLVHISAVTSHESSYIHLVGVTHSGIRLYFS
TTRGQYGDVSKQRPSTLSLVHVRLPPGFTANMSSVRPSNVHVAYYSKGCLMLCASQNEDS
DRLWCLSHDAMPFQQTLMETQVSHQVDSRTWFICEIPSEDHITRREVPSISLSPSKFRPI
SSPSSPSSSIPDPPTVVQQHALPAPRYVLLSSQGSIIISRLRPVDQLRQLMLNNMGPKCP
AVENFFKLHKEDQACATCLILACSTASSDQTIADWATQAFFLHGGEPGGIMMDQQPSPVA
NLAAVFGATTPVVGQSGHDTTTRPFGSPAGATPGSMRPTVSSTPFHQSTPANQPPAASLP
RYAQLSGKFQGLCLYFSRIVRPMWENRLVKEIPVIGHHPVKILMSFNVGSHELSSVLGDM
KALKNFLEKNSQYTMMAENLAMNMPASNSMMRGDPLTSGGPALQREHLRLRAEAYANERQ
ALVNLQKLVNMTVEVLDMLKLLCYHQFHIVAATLSQIDQEELKKMTFRDLVLRGKEMCGS
LITAVINRYIGDNSTTDAISTRLREVCPSLYSTNDAICTKANETLQAAKTAETKSVGDRL
LRESLELFKKVSQQLNLSAVCAEYHEAHYYDGVVDLCLSAAVKRDPHNLALIFYKNGKQP
EDAQGMEAFSARYECYKSITDILDQLLTASQAQPSSPGLPNRPGAPPKPDPNRLSTTDAE
HYLDGMMHRCLDSDDELFHVTLYDWLVNKGLKEQLLEISSPFVEPYIKRAVHYNPDSLEM
LDLLWKYHEKCKNYPAASRILCKLAERHSTDVKLQHRIEYLSRAVMCSKSSSLRTSSASE
GEFLHEIEEKLEVARLQLQVFEAISQSCDHTDQHVQSALSILNSELVDITRLYGDFASEF
GLSKCKLAIVHCAGHYEEDLIQDLWQEIIDKELHDSADKLAATRMTILSKLLISLGKLYS
NSERYFPLDFLVLYLEKKSCELDWNESWVFKAMLDVGVPLPKLHSVYDRHFRAKDPFWQT
SRNPQHMLRVIASLLSTFSDNAALVPVHDRRLFINSTLDAIASYKVELEATPGRPHIIQS
YLDSFTDLQNRLDRMQINRPR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgtaccgcagaatgttcagtcaatggaggcatctctgcaggaagccggtggt
catgtggacatctttctcaataaggataaaggttttccagccctggaggacctcatatct
gctgccaggacaggtccggctacgatgagcggtacaacggacaatgattttccttcatta
gcggcgccctctattggtcttgctgatctaccactccttggaccaacaaagaagacccct
ctgcctccagagcttgtggaacaattcggccatatgcaatgctattgtatgatgggtgct
tttccggagattagcagagcatggctgagcatcgatactgatatctttgtctggaattat
caagatggtggagacttggcttactttgatggactgagtgagaccatcttatatgctggc
cttgtgagacctaagcctaatatcttcaggcctcatatccgcttcctcatgtgtatcgca
acaacggtggagatcgtattgcttggtgtaagctttacacgaccaagagaagacattgat
ccagatgattttgctcagagtgagatgcaccttattccggaacctctctttgccattcca
tctgacaactcgcacatcaccaatatccatggcaccaaagatggacgtatcttcatggct
agcaaagatggctgcctctatgagcttgtctatcaggcacaggacggttggttcagccgt
aaatgtcgtaaggtcaaccattcaagtggcgtcctttcctacctcatacccagcatgctc
cagttttctgacaaagatccaatggttcaaattgctctcgatgaaagccgtcacatcctg
tatacccgctcagaacaaggcaccctatctgtctatgatatgggttcagacggcaaggac
atgaaaaggattacaagcatctactatagcagtatcctacgcgagaccatcgctgcggca
aagactattgataggtcacatttcaagcagctagtgcacatatcagcagtcacaagtcat
gaatcatcgtatatacatctggttggagtaactcactctggcatcagactatatttctcc
accacccgagggcagtatggtgacgtcagcaagcagcgaccatctaccctgtccttggtt
cacgttaggcttcccccaggctttacagcgaacatgtcttcagtccgacctagcaacgta
catgtagcctactacagcaaaggttgtttgatgttatgtgcatcacagaacgaagatagc
gaccgtctttggtgtctaagccacgatgctatgccattccaacagacgcttatggaaaca
caggtatcacaccaagtagacagtaggacctggtttatctgcgagattccgtctgaggac
cacatcactaggagagaagtaccctccatctcactctctccatccaagttcagaccaatc
tcctccccatcatcgccctcatcctctattcctgatcctcccactgtggtgcagcagcat
gccttgccagctcccagatacgtcctcctcagctcacagggaagtattatcatctcgaga
ctgaggccggttgatcaattgaggcagcttatgctgaacaacatgggtcccaaatgccca
gctgtggaaaacttcttcaaattgcacaaggaggaccaggcctgtgctacttgtctgatc
ttggcctgttccactgcttctagtgaccaaaccattgctgattgggctacccaagccttc
tttcttcatggcggtgaaccgggaggtatcatgatggaccagcagccttccccagtggcc
aatctcgctgccgtcttcggagccacaacccctgttgtaggccagagtggtcacgatact
accaccagaccttttggcagtcctgcaggtgccacgcccggttccatgcgccccacggtc
tcctcgacgccctttcaccaatccactcctgccaatcaaccgcccgcagccagtctacct
cggtatgctcagctgtctggtaaattccagggtctgtgcttgtacttcagcagaattgtc
aggcctatgtgggagaaccgtcttgtgaaagaaatacctgtcatcgggcaccaccctgtt
aagatattgatgtccttcaatgttgggagtcatgagctgagttctgtcctaggagatatg
aaggctttgaagaacttccttgagaagaactcccagtataccatgatggctgagaacttg
gctatgaacatgcctgcgagcaatagcatgatgcgaggagatcctctcacatccggtggt
ccagcattgcagagagaacatctcaggttgagagcggaggcgtatgctaatgaacggcag
gccctggtgaaccttcaaaagttggttaacatgacggtcgaggtactcgatatgctgaag
ctcctctgctatcatcagttccacattgttgcagcaacactttctcagattgatcaagag
gagttgaagaagatgacattcagagatctggtattaagaggaaaagaaatgtgtggaagt
ctgatcacagcggtcatcaatcgatacataggagacaacagcacaacggatgccatcagt
actaggctaagagaggtttgcccgtcactctacagcaccaacgatgccatctgtacaaag
gccaacgagacgttacaagcagcaaagacagctgaaaccaagtctgttggggacagacta
ctcagagaatcattagagcttttcaagaaagtgagccagcagcttaacctgtcagctgta
tgtgcagagtaccacgaagctcattactacgatggagtggtagacctgtgtttatcagca
gcagtcaagagagatcctcataacttagctctcatcttctacaagaatggcaagcaacct
gaagatgctcaaggaatggaagcattctcagctagatatgagtgctacaagtcgattacg
gatatcttggaccagttgctgactgccagtcaagcccagccgtcttccccagggctaccc
aatagacctggagctccccccaaacctgatcccaacagactctcaactacagatgcagag
cattatttggacggtatgatgcatcgatgccttgattctgatgacgaactcttccatgtt
accctctatgattggctcgttaacaaaggactcaaggaacagctgcttgagatatcgtcg
cccttcgttgaaccgtacatcaaaagagccgtgcattacaaccccgatagtcttgagatg
ttggatctactttggaagtatcatgagaaatgtaagaactacccggctgcttcaaggatt
ctctgtaagctagcagaaagacacagtacggatgtgaagctacagcataggatagagtac
ctctcccgtgcagtaatgtgcagcaaaagcagcagtctaaggaccagctcagcaagtgaa
ggggaattccttcatgaaattgaggagaaacttgaggttgctcgtcttcaattacaggtg
tttgaagctatctcacagtcatgtgaccatacagaccaacatgtacagagcgccctctcc
atcctcaattcagagttggtcgatatcacaagactgtatggtgactttgccagtgaattt
ggtctatctaaatgtaagctggccatcgtccactgtgctggtcactacgaggaggacctt
atccaagacctgtggcaagaaattattgataaagaattgcatgacagtgcggacaagctg
gcagcaacacgaatgaccattctgagtaaactactcatcagcctgggcaaactgtacagc
aattcagagagatattttccattggacttcttggtgttgtaccttgagaagaagagctgt
gaattggattggaatgaatcctgggtgttcaaggctatgctagatgtgggtgtacctctt
ccaaaactacacagtgtctatgacagacacttcagagccaaggatccattctggcagaca
tctcgtaatcctcagcacatgctgcgtgtcattgcatctcttctctcaacattctctgat
aatgctgctcttgtacctgttcatgataggcgtctgttcatcaactccacactggatgcc
atcgcaagctacaaggtagagctggaggccactcctgggagacctcacattatacagtcc
taccttgatagcttcactgacctacagaaccgtctggacaggatgcaaatcaacagacca
agatag
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